Data Analysis

About

Ultraliser comes integrated with several analysis routines, with which it can provide statistical analysis information either for input data or for output reconstructions including morphologies, meshes and volumes.

How to Generate Analysis Files?

Users can use the command line arguments --stats and --dists to create text files that contain statistics of the input and output data. For example, in ultraNeuroMorpho2Mesh, if the aforementioned flags are appended to the command line arguments of the application, statistical data of the input neuronal morphology and the resulting mesh will be computed and written to output text files. If any of the volume export flags are added to the command line, the statistical data of the created volume will be also computed and written to disk. The analysis files can be used later to plot the data using matplotlib.