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Lower bound albumentation version to handle Nan keypoints #1995

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merged 4 commits into from
Nov 2, 2024
Merged

Lower bound albumentation version to handle Nan keypoints #1995

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abb74fc
Lower bound albumentation version to handle Nan keypoints
roomrys Oct 10, 2024
3b7a14e
Reset tabwidth to 2 in environment ymls
roomrys Oct 10, 2024
9c17232
Merge branch 'elizabeth/update-python-and-dependencies' into liezl/lo…
roomrys Oct 10, 2024
ab4ddd1
Merge branch 'elizabeth/update-python-and-dependencies' into liezl/lo…
eberrigan Nov 1, 2024
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4 changes: 2 additions & 2 deletions .conda/meta.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -56,7 +56,7 @@ requirements:
- sleap-deps::tensorflow ==2.9.2
- conda-forge::tensorflow-hub
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0
- conda-forge::importlib-metadata
run:
Expand Down Expand Up @@ -91,7 +91,7 @@ requirements:
- sleap-deps::tensorflow ==2.9.2
- conda-forge::tensorflow-hub
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0
- conda-forge::importlib-metadata

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4 changes: 2 additions & 2 deletions .conda_mac/meta.yaml
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Expand Up @@ -56,7 +56,7 @@ requirements:
- conda-forge::seaborn
- sleap-deps::tensorflow ==2.12.0
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0

run:
Expand Down Expand Up @@ -87,5 +87,5 @@ requirements:
- conda-forge::seaborn
- sleap-deps::tensorflow ==2.12.0
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0
2 changes: 1 addition & 1 deletion environment.yml
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Expand Up @@ -40,7 +40,7 @@ dependencies:
- sleap-deps::tensorflow ==2.9.2
- conda-forge::tensorflow-hub # Pinned in meta.yml, but no problems here... yet
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0

# Packages required by tensorflow to find/use GPUs
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2 changes: 1 addition & 1 deletion environment_mac.yml
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Expand Up @@ -38,7 +38,7 @@ dependencies:
- conda-forge::seaborn
- sleap-deps::tensorflow ==2.12.0
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0
- pip:
- "--editable=.[conda_dev]"
2 changes: 1 addition & 1 deletion environment_no_cuda.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,7 @@ dependencies:
- sleap-deps::tensorflow ==2.9.2
- conda-forge::tensorflow-hub # Pinned in meta.yml, but no problems here... yet
- conda-forge::qudida
- conda-forge::albumentations
- conda-forge::albumentations >=1.4.15 # Handle Nan keypoints
- conda-forge::ndx-pose <0.2.0

- pip:
Expand Down
2 changes: 1 addition & 1 deletion pypi_requirements.txt
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Expand Up @@ -30,7 +30,7 @@ scikit-learn>=1.0.0
seaborn
tensorflow==2.9.2; platform_machine != 'arm64'
tensorflow-hub
albumentations
albumentations>=1.4.15 # Handle Nan keypoints
ndx-pose<0.2.0
# Silicon Mac specific packages
tensorflow-macos >=2.10.0,<2.13.0; sys_platform == 'darwin' and platform_machine == 'arm64'
Expand Down
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