Use custom modulo implementation #2713
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Continuous integration using conda installation | |
| name: CI | |
| on: | |
| pull_request: | |
| types: [opened, reopened, synchronize] | |
| paths: | |
| - "sleap/**" | |
| - "tests/**" | |
| - ".github/workflows/ci.yml" | |
| - "environment_no_cuda.yml" | |
| - "requirements.txt" | |
| - "dev_requirements.txt" | |
| # push: | |
| # branches: | |
| # - main | |
| # - develop | |
| # paths: | |
| # - "sleap/**" | |
| # - "tests/**" | |
| # - ".github/workflows/ci.yml" | |
| # - "environment_no_cuda.yml" | |
| # - "requirements.txt" | |
| # - "dev_requirements.txt" | |
| jobs: | |
| # Lint | |
| lint: | |
| name: Lint | |
| runs-on: "ubuntu-22.04" | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Set up Python 3.7 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.7 | |
| - name: Install Dependencies | |
| run: | | |
| pip install click==8.0.4 | |
| pip install black==21.6b0 | |
| - name: Run Black | |
| run: | | |
| black --check sleap tests | |
| # Tests | |
| tests: | |
| name: Tests (${{ matrix.os }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-22.04", "windows-2022", "macos-14"] | |
| include: | |
| # Default values | |
| - env_file: environment_no_cuda.yml | |
| # Mac specific values | |
| - os: macos-14 | |
| env_file: environment_mac.yml | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Conda | |
| uses: conda-incubator/setup-miniconda@v3.0.3 | |
| with: | |
| miniforge-version: latest | |
| conda-solver: "libmamba" | |
| environment-file: ${{ matrix.env_file }} | |
| activate-environment: sleap_ci | |
| # Print environment info | |
| - name: Print environment info | |
| shell: bash -l {0} | |
| run: | | |
| which python | |
| conda info | |
| conda list | |
| pip freeze | |
| # Test environment | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| pytest --cov=sleap --cov-report=xml --durations=-1 tests/ | |
| # Upload coverage | |
| - name: Upload coverage | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| fail_ci_if_error: true | |
| verbose: false |