remove tensorflow dependency that is now in mac tensorflow conda package #114
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| # Conda package builds triggered manually. | |
| # To trigger a build, bump the build number in .conda/meta.yaml. | |
| name: Build (manual) | |
| # Uncomment the following lines to trigger a build if the release build failed | |
| on: | |
| push: | |
| paths: | |
| - '.conda/meta.yaml' | |
| - '.conda/condarc.yaml' | |
| - '.conda_mac/meta.yaml' | |
| - '.conda_mac/condarc.yaml' | |
| - '.github/workflows/build_manual.yml' | |
| branches: | |
| # - develop | |
| # - fakebranch | |
| - elizabeth/update-python-and-dependencies | |
| jobs: | |
| build: | |
| name: Build package from push (${{ matrix.os }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-22.04", "windows-2022", "macos-14"] | |
| # https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstrategymatrixinclude | |
| include: | |
| # Use this condarc as default | |
| - condarc: .conda/condarc.yaml | |
| - pyver: "3.10" | |
| # Use special condarc if macos | |
| - os: "macos-14" | |
| condarc: .conda_mac/condarc.yaml | |
| pyver: "3.10" | |
| steps: | |
| # Setup | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3.0.3 | |
| with: | |
| miniforge-version: latest | |
| condarc-file: ${{ matrix.condarc }} | |
| python-version: ${{ matrix.pyver }} | |
| environment-file: environment_build.yml | |
| activate-environment: sleap_ci | |
| conda-solver: "libmamba" | |
| - name: Print environment info | |
| shell: bash -l {0} | |
| run: | | |
| which python | |
| conda info | |
| conda list | |
| # Build pip wheel (Not Windows) | |
| - name: Build pip wheel (Not Windows) | |
| if: matrix.os != 'windows-2022' | |
| shell: bash -l {0} | |
| run: | | |
| python setup.py bdist_wheel | |
| # # Upload pip wheel (Ubuntu) | |
| # - name: Upload pip wheel (Ubuntu) | |
| # if: matrix.os == 'ubuntu-22.04' | |
| # env: | |
| # PYPI_TOKEN: ${{ secrets.PYPI_TOKEN }} | |
| # shell: bash -l {0} | |
| # run: | | |
| # twine upload -u __token__ -p "$PYPI_TOKEN" dist/* --non-interactive --skip-existing --disable-progress-bar | |
| # Build conda package (Ubuntu) | |
| - name: Build conda package (Ubuntu) | |
| if: matrix.os == 'ubuntu-22.04' | |
| shell: bash -l {0} | |
| run: | | |
| conda build .conda --output-folder build | |
| echo "BUILD_PATH=$(pwd)/build" >> "$GITHUB_ENV" | |
| # Build conda package (Windows) | |
| - name: Build conda package (Windows) | |
| if: matrix.os == 'windows-2022' | |
| shell: powershell | |
| run: | | |
| conda build .conda --output-folder build | |
| echo "BUILD_PATH=\$(pwd)\build" >> "$env:GITHUB_ENV" | |
| # Build conda package (Mac) | |
| - name: Build conda package (Mac) | |
| if: matrix.os == 'macos-14' | |
| shell: bash -l {0} | |
| run: | | |
| conda build .conda_mac --output-folder build | |
| echo "BUILD_PATH=$(pwd)/build" >> "$GITHUB_ENV" | |
| # Test built conda package (Ubuntu and Windows) | |
| - name: Test built conda package (Ubuntu and Windows) | |
| if: matrix.os != 'macos-14' | |
| shell: bash -l {0} | |
| run: | | |
| echo "Current build path: $BUILD_PATH" | |
| conda deactivate | |
| echo "Python executable before activating environment:" | |
| which python | |
| echo "Python version before activating environment:" | |
| python --version | |
| echo "Conda info before activating environment:" | |
| conda info | |
| echo "Creating and testing conda environment with sleap package..." | |
| conda create -y -n sleap_test -c file://$BUILD_PATH -c sleap/label/dev -c conda-forge -c nvidia -c anaconda sleap | |
| conda activate sleap_test | |
| echo "Python executable after activating sleap_test environment:" | |
| which python | |
| echo "Python version after activating sleap_test environment:" | |
| python --version | |
| echo "Conda info after activating sleap_test environment:" | |
| conda info | |
| echo "List of installed conda packages in the sleap_test environment:" | |
| conda list | |
| echo "List of installed pip packages in the sleap_test environment:" | |
| pip list | |
| echo "Testing sleap package installation..." | |
| sleap_version=$(python -c "import sleap; print(sleap.__version__)") | |
| echo "Test completed using sleap version: $sleap_version" | |
| # Test built conda package (Mac) | |
| - name: Test built conda package (Mac) | |
| if: matrix.os == 'macos-14' | |
| shell: bash -l {0} | |
| run: | | |
| echo "Current build path: $BUILD_PATH" | |
| conda deactivate | |
| echo "Python executable before activating environment:" | |
| which python | |
| echo "Python version before activating environment:" | |
| python --version | |
| echo "Conda info before activating environment:" | |
| conda info | |
| echo "Creating and testing conda environment with sleap package..." | |
| conda create -y -n sleap_test -c file://$BUILD_PATH -c conda-forge -c anaconda sleap | |
| conda activate sleap_test | |
| echo "Python executable after activating sleap_test environment:" | |
| which python | |
| echo "Python version after activating sleap_test environment:" | |
| python --version | |
| echo "Conda info after activating sleap_test environment:" | |
| conda info | |
| echo "List of installed conda packages in the sleap_test environment:" | |
| conda list | |
| echo "List of installed pip packages in the sleap_test environment:" | |
| pip list | |
| echo "Testing sleap package installation..." | |
| sleap_version=$(python -c "import sleap; print(sleap.__version__)") | |
| echo "Test completed using sleap version: $sleap_version" | |
| # # Login to conda (Ubuntu) | |
| # - name: Login to Anaconda (Ubuntu) | |
| # if: matrix.os == 'ubuntu-22.04' | |
| # env: | |
| # ANACONDA_LOGIN: ${{ secrets.ANACONDA_LOGIN }} | |
| # shell: bash -l {0} | |
| # run: | | |
| # yes 2>/dev/null | anaconda login --username sleap --password "$ANACONDA_LOGIN" || true | |
| # # Login to conda (Windows) | |
| # - name: Login to Anaconda (Windows) | |
| # if: matrix.os == 'windows-2022' | |
| # env: | |
| # ANACONDA_LOGIN: ${{ secrets.ANACONDA_LOGIN }} | |
| # shell: powershell | |
| # run: | | |
| # echo "yes" | anaconda login --username sleap --password "$env:ANACONDA_LOGIN" | |
| # # Login to conda (Mac) | |
| # - name: Login to Anaconda (Mac) | |
| # if: matrix.os == 'macos-14' | |
| # env: | |
| # ANACONDA_LOGIN: ${{ secrets.ANACONDA_LOGIN }} | |
| # shell: bash -l {0} | |
| # run: | | |
| # yes 2>/dev/null | anaconda login --username sleap --password "$ANACONDA_LOGIN" || true | |
| # # Upload conda package (Windows) | |
| # - name: Upload conda package (Windows/dev) | |
| # if: matrix.os == 'windows-2022' | |
| # shell: powershell | |
| # run: | | |
| # anaconda -v upload "build\win-64\*.tar.bz2" --label dev | |
| # # Upload conda package (Ubuntu) | |
| # - name: Upload conda package (Ubuntu/dev) | |
| # if: matrix.os == 'ubuntu-22.04' | |
| # shell: bash -l {0} | |
| # run: | | |
| # anaconda -v upload build/linux-64/*.tar.bz2 --label dev | |
| # # Upload conda package (Mac) | |
| # - name: Upload conda package (Mac/dev) | |
| # if: matrix.os == 'macos-14' | |
| # shell: bash -l {0} | |
| # run: | | |
| # anaconda -v upload build/osx-arm64/*.tar.bz2 --label dev | |
| # - name: Logout from Anaconda | |
| # shell: bash -l {0} | |
| # run: | | |
| # anaconda logout |