fix dependency #1121
Annotations
12 errors and 13 warnings
Run CMD check
R CMD check found WARNINGs
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Run CMD check
Process completed with exit code 1.
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Install dependencies pass 1
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies pass 1
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies pass 1
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies pass 1
package or namespace load failed for ‘AnnotationDbi’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies pass 1
package or namespace load failed for ‘DESeq2’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]):
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Install dependencies pass 1
loading failed
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Install dependencies pass 1
--- re-building ‘introduction.Rmd’ using knitr
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Install dependencies pass 1
processing vignette 'introduction.Rmd' failed with diagnostics:
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Install dependencies pass 1
Vignette re-building failed.
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Install dependencies pass 1
Failed to install 'tidybulk' from local:
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The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run CMD check
'library' or 'require' call not declared from: ‘parallel’
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Run CMD check
'library' or 'require' call not declared from: ‘parallel’
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Install dependencies pass 1
‘nmaxi’ may be used uninitialized in this function [-Wmaybe-uninitialized]
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Install dependencies pass 1
‘out’ may be used uninitialized in this function [-Wmaybe-uninitialized]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
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Install dependencies pass 1
‘fin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
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Install dependencies pass 1
‘smin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
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