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13 Open 70 Closed
13 Open 70 Closed
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Issues list

The sample data of the test_gene_enrichment() function reports an error and cannot be used.
#316 opened Jul 25, 2024 by zhangkaicr
2
Add the method to simplify complete confounders is they are not factor of interest enhancement New feature or request
#301 opened Nov 15, 2023 by stemangiola
@stemangiola
Prepare for upcoming Seurat v5 release
#298 opened Oct 3, 2023 by Gesmira
the attribute "internals" $ tt_columns abundance_scaled, carries the environment with it inflating the RDS file size
#295 opened Sep 11, 2023 by stemangiola
Improve the documentation for tidybulk documentation Improvements or additions to documentation good first issue Good for newcomers
#282 opened Jul 22, 2023 by stemangiola
@GrootJ @aliosmancetin
29
Warning in CHECK, mistery
#273 opened Jun 29, 2023 by stemangiola
pathway analysis using tidybulk
#263 opened Jan 13, 2023 by adityamahadevaniyer
8
for SE save internals within the metadata rather than attributes. enhancement New feature or request
#240 opened Jun 25, 2022 by stemangiola
Allow logFC shrinkage in DESeq enhancement New feature or request
#224 opened Nov 1, 2021 by antass
4
tidybulk Replace pivot_* with select_columns_* enhancement New feature or request
#181 opened May 6, 2021 by stemangiola
3
Feedback from talk: get_bibliography enhancement New feature or request
#180 opened May 5, 2021 by stemangiola
1
for scaling check the presence of a multiplier column
#122 opened Oct 12, 2020 by stemangiola
1
test_gene_overrepresentation: visualising results enhancement New feature or request
#47 opened May 31, 2020 by mblue9
7
ProTip! Follow long discussions with comments:>50.