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fix schema build
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famosab committed Nov 19, 2024
1 parent 7a3fac4 commit 9fff54d
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Showing 8 changed files with 8 additions and 411 deletions.
6 changes: 1 addition & 5 deletions nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -52,7 +52,7 @@ params {
config_profile_url = null

// Schema validation default options
validationSchemaIgnoreParams = 'genomes,igenomes_base'
validate_params = true

}

Expand Down Expand Up @@ -165,10 +165,6 @@ profiles {
// Load nf-core custom profiles from different Institutions
includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null"

// Nextflow plugins
plugins {
id 'nf-validation@1.1.3' // Validation of pipeline parameters and creation of an input channel from a sample sheet
}

// Load igenomes.config if required
includeConfig !params.igenomes_ignore ? 'conf/igenomes.config' : 'conf/igenomes_ignored.config'
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7 changes: 6 additions & 1 deletion nextflow_schema.json
Original file line number Diff line number Diff line change
Expand Up @@ -253,5 +253,10 @@
{
"$ref": "#/$defs/generic_options"
}
]
],
"properties": {
"dict": {
"type": "string"
}
}
}
62 changes: 0 additions & 62 deletions subworkflows/nf-core/utils_nfvalidation_plugin/main.nf

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44 changes: 0 additions & 44 deletions subworkflows/nf-core/utils_nfvalidation_plugin/meta.yml

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200 changes: 0 additions & 200 deletions subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test

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