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Issues: fulcrumgenomics/dagr

60 Open 39 Closed
60 Open 39 Closed
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Issues list

There may be a deadlock in the task scheduler that freezes or slows pipeline execution
#401 opened Mar 1, 2022 by clintval
CPU and memory resource detection should be Docker container aware.
#377 opened Apr 15, 2020 by jacarey
1
API should not allow mixins between VariableResources and FixedResources bug
#371 opened Jan 6, 2020 by clintval
@nh13
3
Improve performance of flatMap in ScatterGather enhancement
#363 opened Aug 22, 2019 by nh13
Empty tasks enhancement
#355 opened Aug 5, 2019 by nh13
5
New Tasks
#354 opened Jul 27, 2019 by averagehat
1
Move to mill
#349 opened May 27, 2019 by nh13
trimming status of input fastqs for FastqToBam
#343 opened Apr 4, 2019 by basesLoaded
I want to know all the inputs and outputs produced by the pipeline, and who made them
#317 opened Nov 30, 2017 by nh13
Improve the documentation of Dagr
#303 opened Jun 17, 2017 by nh13
58 tasks
@nh13 @tfenne
What should PicardMetricsTask do when the prefix is None and the input file is stdin?
#302 opened Jun 16, 2017 by nh13
Idea: run multiple independent pipelines simulataneously
#301 opened Jun 15, 2017 by nh13
Scatter/gather tasks cannot depend upon each other
#300 opened Jun 15, 2017 by nh13
Add new pipelines to execute while dagr is running. enhancement
#296 opened May 19, 2017 by nh13
A task can run even if dependent tasks fail
#290 opened May 2, 2017 by nh13
1
Pipeline logging should describe how the status of all tasks
#288 opened Apr 28, 2017 by nh13
In interactive mode dagr should write the non-interactive log output to a log file in the log dir
#272 opened Mar 22, 2017 by tfenne
Switch to scala 2.12 or enbable building and publishing for both 2.11 and 2.12
#247 opened Jan 21, 2017 by tfenne
6
Improve default behaviour for @arg(minElements)
#240 opened Jan 15, 2017 by tfenne
NullPointerException when using an empty command line argument bug
#232 opened Nov 28, 2016 by nh13
Specify the maximum # of concurrent tasks or file handles as a resource type
#230 opened Nov 3, 2016 by nh13
Support faster dependency resolutions
#228 opened Oct 7, 2016 by nh13
Support URL in command line options enhancement
#226 opened Oct 3, 2016 by nh13
In interactive mode show the output directory (if defined) somewhere in the display.
#224 opened Sep 21, 2016 by tfenne
Have dagr write exit code or completion status to the log file. enhancement
#223 opened Sep 21, 2016 by nh13
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