Per-sample logging #13
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.out and .err files output seperately for each sample
Snakefile taking csv containing sample names (ID), and forward and reverse read paths as input
Working snakefile that takes a samples_file.csv as input, and outputs to a {gene} dir in the snakemake dir.
Broken snakefile that is intended to take a samples_file.csv that also contains paths to specific references to run each sample against.
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.out and .err files output seperately for each sample listed in config.yaml