will this syntax work? add pylint verbose calls #10
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| name: create_test_conda_env | ||
| on: [push] | ||
| jobs: | ||
| build-linux: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: '>=3.9' | ||
| - name: Add conda to system path | ||
| run: | | ||
| # $CONDA is an env var pointing to root of miniconda dir | ||
| echo $CONDA/bin >> $GITHUB_PATH | ||
| - name: Create fre-workflows environment | ||
| run: | | ||
| # create environment containing all dependencies | ||
| # the env cannot be explicitly activated in github CI/CD | ||
| conda env create -f environment.yml --name fre-workflows | ||
| # add conda env's executables to github's PATH equiv. | ||
| echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH | ||
| - name: Run unittest in fre-workflows environment | ||
| run: | | ||
| # try to make sure the right things are in GITHUB_PATH | ||
| echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH | ||
| # lint .cylc workflow files | ||
| cylc lint -v || echo "cylc lint threw non-zero exit code" | ||
| # unittests for data_lineage | ||
| cd data_lineage && \ | ||
| python -m unittest discover -s test -v || \ | ||
| echo "data_lineage unittest failed."; \ | ||
| pylint -v || \ | ||
| echo "pylint threw non-zero exit code."; \ | ||
| cd -; | ||
| # pytest unittests for regrid-xy | ||
| cd app/regrid-xy && \ | ||
| pytest -v -v -rx ./t || \ | ||
| echo "pytest unittests for regrid-xy failed"; \ | ||
| pylint -v || \ | ||
| echo "pylint threw non-zero exit code."; \ | ||
| cd -; | ||
| # pytest unittests for make-timeseries | ||
| cd app/make-timeseries && \ | ||
| pytest -v -v -rx ./test || \ | ||
| echo "pytest for make-timeseries failed"; \ | ||
| pylint -v || \ | ||
| echo "pylint threw non-zero exit code."; \ | ||
| cd -; | ||
| # pytest unittests for remap-pp-components | ||
| cd app/remap-pp-components && \ | ||
| pytest -v -v -rx ./t/ || \ | ||
| echo "pytest for remap-pp-components failed"; \ | ||
| pylint -v || \ | ||
| echo "pylint threw non-zero exit code."; \ | ||
| cd -; | ||
| # pytest unittests for other things in this repository | ||
| pytest -v -v -rx ./tests || \ | ||
| echo "pytest unittests for root directory failed :-("; | ||
