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will this syntax work? add pylint verbose calls
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ilaflott committed Oct 4, 2024
1 parent a25b4db commit 16d4c19
Showing 1 changed file with 65 additions and 44 deletions.
109 changes: 65 additions & 44 deletions .github/workflows/create_test_conda_env.yml
Original file line number Diff line number Diff line change
Expand Up @@ -4,47 +4,68 @@ on: [push]

jobs:
build-linux:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '>=3.9'

- name: Add conda to system path
run: |
# $CONDA is an env var pointing to root of miniconda dir
echo $CONDA/bin >> $GITHUB_PATH
- name: Create fre-workflows environment
run: |
# create environment containing all dependencies
# the env cannot be explicitly activated in github CI/CD
conda env create -f environment.yml --name fre-workflows
# add conda env's executables to github's PATH equiv.
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH
- name: Run unittest in fre-workflows environment
run: |
# try to make sure the right things are in GITHUB_PATH
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH
# lint .cylc workflow files
cylc lint -v || echo "cylc lint threw non-zero exit code"
# unittests for data_lineage
cd data_lineage && python -m unittest discover -s test -v || echo "data_lineage unittest failed."; cd -;
# pytest unittests for regrid-xy
cd app/regrid-xy && pytest -v -v -rx ./t || echo "pytest unittests for regrid-xy failed"; cd -;
# pytest unittests for make-timeseries
cd app/make-timeseries && pytest -v -v -rx ./test || echo "pytest for make-timeseries failed"; cd -;
# pytest unittests for remap-pp-components
cd app/remap-pp-components && pytest -v -v -rx ./t/ || echo "pytest for remap-pp-components failed"; cd -;
# pytest unittests for other things in this repository
pytest -v -v -rx ./tests || echo "pytest unittests for root directory failed :-(";
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '>=3.9'

- name: Add conda to system path
run: |
# $CONDA is an env var pointing to root of miniconda dir
echo $CONDA/bin >> $GITHUB_PATH

- name: Create fre-workflows environment
run: |
# create environment containing all dependencies
# the env cannot be explicitly activated in github CI/CD
conda env create -f environment.yml --name fre-workflows

# add conda env's executables to github's PATH equiv.
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH

- name: Run unittest in fre-workflows environment
run: |
# try to make sure the right things are in GITHUB_PATH
echo $CONDA/envs/fre-workflows/bin >> $GITHUB_PATH

# lint .cylc workflow files
cylc lint -v || echo "cylc lint threw non-zero exit code"

# unittests for data_lineage
cd data_lineage && \
python -m unittest discover -s test -v || \
echo "data_lineage unittest failed."; \
pylint -v || \
echo "pylint threw non-zero exit code."; \
cd -;

# pytest unittests for regrid-xy
cd app/regrid-xy && \
pytest -v -v -rx ./t || \
echo "pytest unittests for regrid-xy failed"; \
pylint -v || \
echo "pylint threw non-zero exit code."; \
cd -;

# pytest unittests for make-timeseries
cd app/make-timeseries && \
pytest -v -v -rx ./test || \
echo "pytest for make-timeseries failed"; \
pylint -v || \
echo "pylint threw non-zero exit code."; \
cd -;

# pytest unittests for remap-pp-components
cd app/remap-pp-components && \
pytest -v -v -rx ./t/ || \
echo "pytest for remap-pp-components failed"; \
pylint -v || \
echo "pylint threw non-zero exit code."; \
cd -;

# pytest unittests for other things in this repository
pytest -v -v -rx ./tests || \
echo "pytest unittests for root directory failed :-(";

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