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Issues: BaderLab/saber
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Switch to AutoModel API
design
enhancement
New feature or request
feature
#174
opened Aug 20, 2019 by
JohnGiorgi
Truncating should effect only the train set
invalid
This doesn't seem right
#166
opened Aug 6, 2019 by
JohnGiorgi
Pad sequences with something other than keras.preprocessing.text
chore
#158
opened Jul 29, 2019 by
JohnGiorgi
Splitting of training data should be model agnostic.
enhancement
New feature or request
invalid
This doesn't seem right
#153
opened Jul 24, 2019 by
JohnGiorgi
Metrics class should behave more like Keras's default History Callback
chore
enhancement
New feature or request
invalid
This doesn't seem right
#149
opened Jul 8, 2019 by
JohnGiorgi
Try out new grounding service
enhancement
New feature or request
feature
#147
opened Jul 3, 2019 by
JohnGiorgi
saber.load_dataset() should be able to pull from pubannotation.
enhancement
New feature or request
feature
#146
opened Jun 15, 2019 by
JohnGiorgi
Need nicely formatted string representation of a PyTorch model
design
enhancement
New feature or request
production
#140
opened Jun 3, 2019 by
JohnGiorgi
Switch to SciSpacy
enhancement
New feature or request
optimization
production
#136
opened May 20, 2019 by
JohnGiorgi
Evaluation is slow
enhancement
New feature or request
feature
optimization
production
#132
opened May 16, 2019 by
JohnGiorgi
Better Handling of Rare Words
enhancement
New feature or request
feature
optimization
#131
opened May 16, 2019 by
JohnGiorgi
Easy way to evaluate a model
enhancement
New feature or request
invalid
This doesn't seem right
#125
opened Mar 21, 2019 by
JohnGiorgi
Config file needs to be re-written to better handle multiple models
enhancement
New feature or request
invalid
This doesn't seem right
#120
opened Feb 28, 2019 by
JohnGiorgi
Argument Something isn't working
invalid
This doesn't seem right
fine_tune_word_embeddings
has no effect when transfer learning
bug
#105
opened Dec 14, 2018 by
JohnGiorgi
LR Range Test Graphs
design
enhancement
New feature or request
feature
#89
opened Nov 13, 2018 by
JohnGiorgi
Some command line arguments are useless
bug
Something isn't working
design
invalid
This doesn't seem right
#76
opened Oct 26, 2018 by
JohnGiorgi
Try weighting the importance of target classes
discussion
enhancement
New feature or request
feature
production
#68
opened Oct 20, 2018 by
JohnGiorgi
4 tasks
debug argument should partially load a dataset
enhancement
New feature or request
invalid
This doesn't seem right
#65
opened Oct 20, 2018 by
JohnGiorgi
Cyclic learning rates
enhancement
New feature or request
feature
#56
opened Oct 15, 2018 by
JohnGiorgi
2 tasks
Cannot supply PMID when using Saber.annotate()
enhancement
New feature or request
feature
invalid
This doesn't seem right
#54
opened Oct 5, 2018 by
JohnGiorgi
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