FrogNetworks

Analysis of co-calling networks for frog community data from the North American Amphibian Monitoring Program (NAAMP).

Foreman, T.M., Grant, E.H.C., and Weir, L.A., 2017, North American Amphibian Monitoring Program (NAAMP) anuran detection data from the eastern and central United States (1994-2015): U.S. Geological Survey data release, https://doi.org/10.5066/F7G44NG0

Data files:

• CountsWithComplexes.csv- original NAAMP data for counts
• CountsWithoutComplexes.csv- original NAAMP data for counts (excluding species complex designations)
• frogedgelist.csv- edgelist generated from CountsWithComplexes.csv using GenerateEdgeLists.Rmd
• frogedgelist_cwoc.csv - edgelist generated from CountsWithoutComplexes.csv using GenerateEdgeLists.Rmd

Code files:

• GenerateEdgeLists.Rmd- generate edgelists from CountsWithComplexes.csv and CountsWithoutComplexes.csv datasets
• CountsWithComplexes.Rmd- generate frigures for Hyla cinerea for counts with complexes data using frogedgelist.csv
• CountsWithoutComplexes.Rmd- generate frigures for Hyla cinerea for counts with complexes data using frogedgelist_cwoc.csv
• CWC_chrysoscelis.Rmd -generate frigures for Hyla chrysoscelis for counts with complexes data using frogedgelist.csv
• CWOC_chrysoscelis.Rmd- generate frigures for Hyla chrysoscelis for counts with complexes data using frogedgelist_cwoc.csv

Figure metadata:

Figures were generated for two focal species Hyla chrysoscelis and Hyla cinerea. All Hyla chrysoscelis figures begin with "Chrysoscelis"

Nomenclature:

• cwoc= Counts without Complexes
• cwc= Counts with Complexes
• global= global network for given focal species
• dd= degree distribution
• star= star network
• circle =circle network