Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Bump the pipeline-submodules group across 1 directory with 2 updates #309

Merged

Conversation

dependabot[bot]
Copy link
Contributor

@dependabot dependabot bot commented on behalf of github Sep 9, 2024

Bumps the pipeline-submodules group with 2 updates in the / directory: external/pipeline-Nextflow-config and external/pipeline-Nextflow-module.

Updates external/pipeline-Nextflow-config from be1eaf5 to 23b7b4e

Commits
  • 23b7b4e Merge pull request #71 from uclahs-cds/yashpatel-fix-choices
  • b52420d Remove redundant check
  • eb8cc65 Update CHANGELOG
  • 3454bc4 Add fix to properly check choices when given with certain types
  • a4e99e0 Merge pull request #68 from uclahs-cds/yashpatel-generalize-type-name
  • 3b32ea9 Merge branch 'main' into yashpatel-generalize-type-name
  • 2127286 Merge pull request #69 from uclahs-cds/nwiltsie-allow-gstring-path
  • 964e0b9 Fix bug with warning message
  • d16e781 Allow Path schema type to be a GString
  • 49eb3e7 Add comma
  • Additional commits viewable in compare view

Updates external/pipeline-Nextflow-module from ef40c10 to 1cfa9fa

Commits
  • 1cfa9fa Merge pull request #45 from uclahs-cds/kpash-update-indexfile-with-cram
  • 0115f96 style changes
  • 3021ddf Update modules/common/indexFile/main.nf
  • 251a226 Update modules/common/indexFile/main.nf
  • 428529b add @​kiarod to metadata.yaml
  • 80a8027 Update indexFile to support cram file format
  • 537da32 Merge pull request #44 from uclahs-cds/nwiltsie-pipeval-with-metadata
  • c462931 Support new pipeval entrypoint
  • 12bd361 Merge branch 'main' into nwiltsie-pipeval-with-metadata
  • c785ee5 Change PipeVal command because the interface was changed (#43)
  • Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
  • @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
  • @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
  • @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
  • @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Sep 9, 2024
@sorelfitzgibbon
Copy link
Contributor

@dependabot rebase

@dependabot dependabot bot force-pushed the dependabot/submodules/pipeline-submodules-1b9227ebd9 branch 2 times, most recently from 780e02b to 72678dd Compare October 18, 2024 21:05
Bumps the pipeline-submodules group with 2 updates in the / directory: [external/pipeline-Nextflow-config](https://github.com/uclahs-cds/pipeline-Nextflow-config) and [external/pipeline-Nextflow-module](https://github.com/uclahs-cds/pipeline-Nextflow-module).


Updates `external/pipeline-Nextflow-config` from `be1eaf5` to `23b7b4e`
- [Release notes](https://github.com/uclahs-cds/pipeline-Nextflow-config/releases)
- [Commits](uclahs-cds/pipeline-Nextflow-config@be1eaf5...23b7b4e)

Updates `external/pipeline-Nextflow-module` from `ef40c10` to `1cfa9fa`
- [Commits](uclahs-cds/pipeline-Nextflow-module@ef40c10...1cfa9fa)

---
updated-dependencies:
- dependency-name: external/pipeline-Nextflow-config
  dependency-type: direct:production
  dependency-group: pipeline-submodules
- dependency-name: external/pipeline-Nextflow-module
  dependency-type: direct:production
  dependency-group: pipeline-submodules
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot force-pushed the dependabot/submodules/pipeline-submodules-1b9227ebd9 branch from 72678dd to a42b6a2 Compare October 21, 2024 21:56
@sorelfitzgibbon sorelfitzgibbon merged commit b2ea350 into main Oct 25, 2024
7 checks passed
@dependabot dependabot bot deleted the dependabot/submodules/pipeline-submodules-1b9227ebd9 branch October 25, 2024 20:55
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
dependencies Pull requests that update a dependency file
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant