plot_venn_R -> plot_VennDiagram_R

uclahs-cds · Aug 2, 2023 · d003dd7 · d003dd7
1 parent 887ab0b
commit d003dd7
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diff --git a/module/intersect-processes.nf b/module/intersect-processes.nf
@@ -50,7 +50,7 @@ process intersect_VCFs_BCFtools {
     """
     }
 
- process plot_venn_R {
+ process plot_VennDiagram_R {
      container params.docker_image_r_VennDiagram
      publishDir path: "${params.workflow_output_dir}/output",
          mode: "copy",

diff --git a/module/intersect.nf b/module/intersect.nf
@@ -1,5 +1,5 @@
 include { generate_sha512sum } from './common'
-include { intersect_VCFs_BCFtools; plot_venn_R } from './intersect-processes.nf'
+include { intersect_VCFs_BCFtools; plot_VennDiagram_R } from './intersect-processes.nf'
 
 workflow intersect {
     // pass bin directory in project folder as channel into docker
@@ -24,7 +24,7 @@ workflow intersect {
                 .map{ it -> ["${file(it).getName().split('_')[0]}-SNV-idx", it]}
                 )
         generate_sha512sum(file_for_sha512)
-        plot_venn_R(
+        plot_VennDiagram_R(
             script_dir_ch,
             intersect_VCFs_BCFtools.out.isec_dir,
         )