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Checklist
Formatting
I have read the code review guidelines and the code review best practice on GitHub check-list.
The name of the branch is meaningful and well formatted following the standards, using [AD_username (or 5 letters of AD if AD is too long)-[brief_description_of_branch].
I have set up or verified the branch protection rule following the github standards before opening this pull request.
File Updates
I have ensured that the version number update follows the versioning standards.
I have updated the version number/dependencies and added my name to the maintainer list in the
Dockerfile
.I have updated the version number/feature changes in the
README.md
.I have updated the version number and added my name to the contributors list in the
metadata.yaml
.I have added the changes included in this pull request to the
CHANGELOG.md
under the next release version or unreleased, and updated the date.CHANGELOG.md
in the release.Docker Hub Auto Build Rules
blcdsdockerregistry
on Docker Hub.Docker Image Testing
docker run
command as described below.Testing
Test script runs
MuSE call
andMuSE sump
and compares output with expected. Tests passed if fileerror-if-no-empty
is emptysbatch --partition F16 --cpus-per-task 4 --mem 8G /hot/software/image/docker-MuSE/Docker/development/test-files/runTestMuse.sh
output:
/hot/software/image/docker-MuSE/Docker/development/unreleased/sfitz-update-to-2.0.4
log:
/hot/software/image/docker-MuSE/Docker/development/unreleased/sfitz-update-to-2.0.4/slurm-77902.out
Description
Update to version 2.0.4, hopefully fixing the error causing MuSE call to sporadically hang up indefinitely. https://github.com/wwylab/MuSE/releases/tag/v2.0.4