A fast and sensitive gapped read aligner

An ultrafast memory-efficient short read aligner

Arioc: GPU-accelerated DNA short-read alignment

BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper

The Modular Aligner and The Modular SV Caller

An accurate aligner of long reads to a variation graph, based on co-linear chaining

Long Approximate Matches-based Split Aligner

Evaluation tools for "A performant bridge between fixed-size and variable-size seeding"

Materials & Methods for CNV calling with Genalice software against a benchmark dataset

A generic DNA read aligner that allows to use different combinations of seeding and extension algorithms.