A code to generate atomic structure with symmetry

Free and open-source code package designed to perform PyMEEP FDTD simulations applied to Plasmonics (UBA+CONICET) [Buenos Aires, Argentina]

A Matlab code for tracking colloidal fluorescent nanoparticles.

The Otago Research Genetic Algorithm for Nanoclusters, Including Structural Methods and Similarity (Organisms) program is a genetic algorithm designed to globally optimise nanoclusters (also known as clusters or nanoparticles)

Python Code for Processing LAMMPS Data generated for two data types: LAMMPS trajectory file and LAMMPS dump files. Subsequently, the code involves post-processing of the data to give interfacial heat flux, temperature discontinuity and ultimately interfacial conductance using the atomistic nodal approach. Pythode code is also presented as a work…

Desktop application for detection size and shape of gold nanoparticles and nanorods from TEM image (bachelor's project)

PBM-CFD solvers for predicting particle size distributions

"aggregate_gen" -- An efficient C++ code for generating fractal cluster of spheres

A molecular dynamics approach to study the permeation of nanoparticles through lipid bilayer

Iterative Particle Analysis Tool introduced in paper https://academic.oup.com/mam/advance-article/doi/10.1093/micmic/ozad036/7162605

NanoTrackJ is an ImageJ/Fiji plugin to characterize the size of nanoparticles by its diffusion trajectories.

Semi-supervised VAE for data with the rotational disorder

Paper on how to supress background while imaging gold nanorods through the use of the anti-Stokes emission.

This is a computational exercise for learning about silver nanoprisms and why their colour is related to their diameter. Runs in Google Colab and uses Python3. Designed for high school students.

C++ template library for Discrete Element Method (DEM) simulations

Analyze two-component nanoparticle properties for classical molecular dynamics simulations

High throughput analysis of NTA data to evaulate particle interaction. Also gives results of general NTA analysis

INSA 4GP Multi-Project Computer-Vision and Deep-Learning for NPs Identification and Classification

PBPK Modeling For Therapeutic Nanoparticles Loaded With Drug

Scripts to compute field enhancements of plasmonic nanostrucutres, mirrored from https://gitlab.com/theoretical-chemistry-jena/quantum-dynamics/plasmonic-meep/