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multi-locus-sequence-typing

Here are 5 public repositories matching this topic...

lmc297 / BTyper3

In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data

taxonomy mlst virulence-factor average-nucleotide-identity multi-locus-sequence-typing bacillus bacillus-cereus

Updated May 8, 2024
Python

lmc297 / seq2mlst

In silico multi-locus sequence typing (MLST) for bacterial genomes

mlst multi-locus-sequence-typing bacterial-genomes

Updated Apr 20, 2018

lmc297 / BTyper

Rapid, in silico characterization of Bacillus cereus group isolates using WGS data

mlst average-nucleotide-identity virulence-gene antimicrobial-resistance-genes multi-locus-sequence-typing bacterial-genomes bacillus

Updated Sep 29, 2022

lmc297 / BMiner

A companion application for analyzing and viewing BTyper output files in aggregate

mlst virulence-gene antimicrobial-resistance-genes multi-locus-sequence-typing bacterial-genomes bacillus

Updated Mar 30, 2021
R

eliottBo / MLSTclassifier_cd

multi-locus sequence type clade classifier for Clostridioides difficile

classifier machine-learning bioinformatics tool microbiology mlst multi-locus-sequence-typing clade

Updated Jun 28, 2024
Python

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