Artificial agents developing chemotaxis using probabilistic spiking perceptrons

A Finite Element Approximation of a Cahn--Hilliard Tumour Model with FEniCS, by Dennis Trautwein (2020).

A sample application attempting to simulate Chemotaxis, the movement of an organism either toward or away from chemicals

Code implementation for the paper about integration of temporal and spatial information in chemotaxis using reinforcement learning

Multiscale modeling of E.coli chemotaxis

Research proposal for the study of C. serpentina nesting behaviors using novel methods and robotics.

Scala/JavaFX GUI Chemotaxis Visualizer with Temporal Manipulation

This repository will have all the code for figures and videos constructed for the paper "Analysis and Simulation of a Novel Run-and-Tumble Model with Autochemotaxis", which will appear in the Journal of Mathematical Biology.

Endothelial cells moving in a chemical field

Cell Chemotaxis Simulations, python implementation

Diffusion model of a system where sender strains produce AHL and has induced motility in the presence of arabinose. AHL diffuses and motility in receiver strains.

Code from my dissertation at the University of Delaware titled "Microscopic Interactions Lead to Macroscopic Dynamics: An Analysis of Various Flocking Mechanisms."

Contains public resources (code/data) linked to publications