Python package for processing image-based profiling data
Predicting Cell Health with Morphological Profiles
Predicting pharmacodynamic responses to cancer drugs using cell morphology
High-dimensional phenotyping to define the genetic basis of cellular morphology
👩🍳 Recipe repository for image-based profiling of Pooled Cell Painting experiments
Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic
Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research
🛠️ Use me to version control Pooled Cell Painting data and processing pipelines
Script to parse a Phenix metadata XML file and generate a .CSV for CellProfiler's loaddata module
Scripts for processing morphological profiling data using cytominer
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