Various tools for analyzing staple strands in DNA origami structures created with cadnano.
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Updated
Mar 15, 2021 - Python
Various tools for analyzing staple strands in DNA origami structures created with cadnano.
Tool to validate DNA origami nanostructure designs made in caDNAno2, providing various informatics regarding the structure oligonucleotides.
This package is for the analysis of DNA origami structures designed in caDNAno2. While it is still early in development, currently it will scan the staple strands in the .json design file and color-label any potential strands which may impede proper folding (such as kinetic trap strands or sandwich strands).
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