deploy: 85da5c1

main/imspy/.buildinfo

@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file records the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 6a2a48b2f86eb88b01a898cf9d4af968
+tags: 645f666f9bcd5a90fca523b33c5a78b7

main/imspy/_sources/imspy.algorithm.ccs.rst.txt

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+imspy.algorithm.ccs package
+===========================
+
+Submodules
+----------
+
+imspy.algorithm.ccs.predictors module
+-------------------------------------
+
+.. automodule:: imspy.algorithm.ccs.predictors
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm.ccs
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.algorithm.intensity.rst.txt

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+imspy.algorithm.intensity package
+=================================
+
+Submodules
+----------
+
+imspy.algorithm.intensity.predictors module
+-------------------------------------------
+
+.. automodule:: imspy.algorithm.intensity.predictors
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.algorithm.intensity.utility module
+----------------------------------------
+
+.. automodule:: imspy.algorithm.intensity.utility
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm.intensity
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.algorithm.ionization.rst.txt

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+imspy.algorithm.ionization package
+==================================
+
+Submodules
+----------
+
+imspy.algorithm.ionization.predictors module
+--------------------------------------------
+
+.. automodule:: imspy.algorithm.ionization.predictors
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm.ionization
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.algorithm.pretrained.rst.txt

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+imspy.algorithm.pretrained package
+==================================
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm.pretrained
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.algorithm.rst.txt

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+imspy.algorithm package
+=======================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   imspy.algorithm.ccs
+   imspy.algorithm.intensity
+   imspy.algorithm.ionization
+   imspy.algorithm.pretrained
+   imspy.algorithm.rt
+
+Submodules
+----------
+
+imspy.algorithm.hashing module
+------------------------------
+
+.. automodule:: imspy.algorithm.hashing
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.algorithm.mixture module
+------------------------------
+
+.. automodule:: imspy.algorithm.mixture
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.algorithm.utility module
+------------------------------
+
+.. automodule:: imspy.algorithm.utility
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.algorithm.rt.rst.txt

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+imspy.algorithm.rt package
+==========================
+
+Submodules
+----------
+
+imspy.algorithm.rt.predictors module
+------------------------------------
+
+.. automodule:: imspy.algorithm.rt.predictors
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.algorithm.rt
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.chemistry.rst.txt

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+imspy.chemistry package
+=======================
+
+Submodules
+----------
+
+imspy.chemistry.amino\_acids module
+-----------------------------------
+
+.. automodule:: imspy.chemistry.amino_acids
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.constants module
+--------------------------------
+
+.. automodule:: imspy.chemistry.constants
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.elements module
+-------------------------------
+
+.. automodule:: imspy.chemistry.elements
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.mobility module
+-------------------------------
+
+.. automodule:: imspy.chemistry.mobility
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.sum\_formula module
+-----------------------------------
+
+.. automodule:: imspy.chemistry.sum_formula
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.unimod module
+-----------------------------
+
+.. automodule:: imspy.chemistry.unimod
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.chemistry.utility module
+------------------------------
+
+.. automodule:: imspy.chemistry.utility
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.chemistry
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.data.rst.txt

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+imspy.data package
+==================
+
+Submodules
+----------
+
+imspy.data.peptide module
+-------------------------
+
+.. automodule:: imspy.data.peptide
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.data.spectrum module
+--------------------------
+
+.. automodule:: imspy.data.spectrum
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.data
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.rst.txt

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+imspy Package
+=============
+
+The `imspy` package provides tools for X, Y, and Z. This page introduces the main module and gives an overview of its submodules.
+
+API Documentation
+-----------------
+
+.. automodule:: imspy
+   :members:
+   :undoc-members:
+   :show-inheritance:

main/imspy/_sources/imspy.simulation.rst.txt

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+imspy.simulation package
+========================
+
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   imspy.simulation.timsim
+
+Submodules
+----------
+
+imspy.simulation.acquisition module
+-----------------------------------
+
+.. automodule:: imspy.simulation.acquisition
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.annotation module
+----------------------------------
+
+.. automodule:: imspy.simulation.annotation
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.experiment module
+----------------------------------
+
+.. automodule:: imspy.simulation.experiment
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.feature module
+-------------------------------
+
+.. automodule:: imspy.simulation.feature
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.handle module
+------------------------------
+
+.. automodule:: imspy.simulation.handle
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.isotopes module
+--------------------------------
+
+.. automodule:: imspy.simulation.isotopes
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.noise module
+-----------------------------
+
+.. automodule:: imspy.simulation.noise
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.proteome module
+--------------------------------
+
+.. automodule:: imspy.simulation.proteome
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.tdf module
+---------------------------
+
+.. automodule:: imspy.simulation.tdf
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+imspy.simulation.utility module
+-------------------------------
+
+.. automodule:: imspy.simulation.utility
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
+Module contents
+---------------
+
+.. automodule:: imspy.simulation
+   :members:
+   :undoc-members:
+   :show-inheritance: