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Issues list

Issues integrating GPU-accelerated search in colabfold alignment protocol
#904 opened Nov 22, 2024 by clami66
2
Not enough memory to keep dbreader/write in memory!
#903 opened Nov 22, 2024 by htran76
1
Odd Representative Cluster Behaviour / Selection
#902 opened Nov 14, 2024 by rpalmavejares
Error with very small inputs: Please use a computer with more main memory
#901 opened Nov 12, 2024 by ktmeaton
2
Question: best way to merge resulting a3m msa DBs
#900 opened Nov 11, 2024 by EvanKomp
3
OOM Error
#898 opened Oct 25, 2024 by angelapredolac
1
Question: ColabFold search pipeline for very large query, less sensitivity acceptable
#897 opened Oct 21, 2024 by EvanKomp
2
How to speed up MMseqs2 taxonomy assignment with GTDB database on large contigs?
#895 opened Oct 18, 2024 by lucianhu
mmseqs download will no longer get the most up-to-date nr/nt databases
#893 opened Oct 3, 2024 by charlesfoster
1
linclust on fasta file or DB file?
#892 opened Sep 24, 2024 by MarliesJFrancine
1
Easy way of creating a GTDB database from an older version
#891 opened Sep 24, 2024 by MartaCobo
1
easy-search didn't return the alnResult.m8 in tmp folder
#890 opened Sep 20, 2024 by Huilin-Li
病毒的物种分类，建议用哪个数据库？
#888 opened Sep 18, 2024 by vivian-0508
uniprotdb.index file is showing as generic file
#887 opened Sep 17, 2024 by vineethvintu
1
Create GTDB DNA Taxonomy database in mmseq2
#884 opened Aug 30, 2024 by feixiang1209
1
Error : mmseqs linclust : pre-clustering step died
#883 opened Aug 29, 2024 by S1llyBoy
prefilter step died when running easy-search: Segmentation fault (core dumped)
#882 opened Aug 26, 2024 by szimmerman92
2
How is a cluster representative sequence determined
#881 opened Aug 26, 2024 by nooryoussef
Job stays hanging after msg "can not touch into memory" using easy-search
#877 opened Aug 21, 2024 by xtj87515
Error using search module: databse type (Clustering)
#876 opened Aug 19, 2024 by PierreFoucault
3
MPI version of mmseqs cluster
#874 opened Aug 14, 2024 by zhaozhang
Error: createbintaxonomy failed with malloc error
#871 opened Aug 11, 2024 by zrqiao
6
Heavy Slowdown with no output while running mmseqs linclust in a big database with not enough ram.
#870 opened Aug 6, 2024 by Alvaro-Nostrum
2
Switch to mimalloc from nedmalloc for cygwin builds help wanted
#869 opened Jul 31, 2024 by milot-mirdita
easy-linclust not work with Ungapped alignment step died
#866 opened Jul 24, 2024 by jackhu3301
ProTip! What’s not been updated in a month: updated:<2024-10-25.