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OrgaMapper v2.0.0

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@schmiedc schmiedc released this 05 Apr 16:51
· 2 commits to main since this release
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Improvements of the image analysis workflow with new features and further analysis:

  • Loading of segmentations and detections by other tools.
  • Distance and intensity profile measurements from the plasma membrane edge.
  • Single cell segmentation based on plasma membrane stain.
  • Analysis of radial distribution of organelles.

All of these new functions are described with example data on our updated site so other users easily can implement them in their own analysis: https://schmiedc.github.io/OrgaMapper/

There is new test data: https://doi.org/10.5281/zenodo.10932803

Update of the analysis script is necessary: https://github.com/schmiedc/OrgaMapper_Rshiny