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installation tweaks
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rodrigo committed Oct 21, 2016
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11 changes: 10 additions & 1 deletion README.md
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Expand Up @@ -14,8 +14,17 @@ If you are using this tool, **make sure to cite and visit the CAZy website**
*cazy-parser* is a tool that extract information from [CAZy](http://www.cazy.org/) in a more usable and readable format. Firstly, a script reads the HTML structure and creates a mirror of the database as a tab delimited file. Secondly, information is extracted from the database according to user inputted parameters and presented to the user as a set of accession codes.

## Installation
`pip install cazy-parser`
`$ pip install cazy-parser`

or

Download latest source from [this link](https://pypi.python.org/pypi/cazy-parser)

```
$ tar -zxvf cazy-parser-x.x.x.tar.gz
$ cd cazy-parser-x.x.x
$ python setup.py install
```
## Usage

*Please note that both steps require an internet conection*
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20 changes: 10 additions & 10 deletions cazy_parser.egg-info/PKG-INFO
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Metadata-Version: 1.1
Name: cazy-parser
Version: 1.0.0b16
Version: 1.0.1
Summary: A way to extract specific information from CAZy
Home-page: https://github.com/rodrigovrgs/cazy-parser
Author: Rodrigo Honorato
Author-email: rvhonorato@gmail.com
License: GPL3
Description: cazy-parser
============

The `Carbohydrate-Active enZYmes Database (CAZy) <https://www.cazy.org>`_ provides access to a sequence based classification of enzyme that are responsible for the assembly, modification and breakdown of oligo and polysaccharides.

This database has been online for eighteen years providing relevant genomic, structural and biochemical data on carbohydrate-active enzymes, such asglycoside hydrolases, glycosyl transferases, polysaccharide lyases, carbohydrateesterases and similar enzymes with auxiliary activities. The database isorganized and presented to the user as a series of highly annotated HTML tables.

This script provides a way to extract information from the database according to user need.

Installation
============
::

pip install cazy-parser

Documentation
=============

Please refer to the `project page <https://github.com/rodrigovrgs/cazy-parser/blob/master/README.md>`_ for usage and more information

Keywords: cazy database datamining
Platform: UNKNOWN
Classifier: Development Status :: 4 - Beta
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Science/Research
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
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3 changes: 1 addition & 2 deletions cazy_parser.egg-info/SOURCES.txt
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Expand Up @@ -9,5 +9,4 @@ cazy_parser.egg-info/SOURCES.txt
cazy_parser.egg-info/dependency_links.txt
cazy_parser.egg-info/entry_points.txt
cazy_parser.egg-info/requires.txt
cazy_parser.egg-info/top_level.txt
paper/__init__.py
cazy_parser.egg-info/top_level.txt
1 change: 0 additions & 1 deletion cazy_parser.egg-info/top_level.txt
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cazy_parser
paper
2 changes: 1 addition & 1 deletion setup.py
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Expand Up @@ -29,7 +29,7 @@ def run(self):
# Versions should comply with PEP440. For a discussion on single-sourcing
# the version across setup.py and the project code, see
# https://packaging.python.org/en/latest/single_source_version.html
version='1.0.0',
version='1.0.1',

description='A way to extract specific information from CAZy',
long_description=long_description,
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