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Only sample the read extremities rather than the entire read to prevent a lot of false positive overrepresented sequences. #205

Merged
merged 7 commits into from
Nov 20, 2024
Merged

Only sample the read extremities rather than the entire read to prevent a lot of false positive overrepresented sequences. #205

merged 7 commits into from
Nov 20, 2024

Commits on Nov 19, 2024

  1. Rename SequenceDuplication to OverrpresentedSequences

    @rhpvorderman
    rhpvorderman committed Nov 19, 2024
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  2. Add facilities to set values for from beginning and end sampling

    @rhpvorderman
    rhpvorderman committed Nov 19, 2024
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Commits on Nov 20, 2024

  1. Implement sampling from extremeties

    @rhpvorderman
    rhpvorderman committed Nov 20, 2024
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  2. Rename tests

    @rhpvorderman
    rhpvorderman committed Nov 20, 2024
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  3. Add a behavior test for overrepresented sequences sampling

    @rhpvorderman
    rhpvorderman committed Nov 20, 2024
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  4. Add overrepresented sequencing sampling to the changelog

    @rhpvorderman
    rhpvorderman committed Nov 20, 2024
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  5. Update documentation with changes to the overrepresented sequences al… 

    …gorithm
    @rhpvorderman
    rhpvorderman committed Nov 20, 2024
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