Create batch run #19
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: 'Create batch run' | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| project: | |
| description: Project identifier (core or arbimon) or url slug (e.g. puerto-rico-island-wide) | |
| required: true | |
| sites: | |
| description: Comma-separated list of site names including wildcards (e.g. AB2,AB3,CD*) - empty for all sites | |
| year: | |
| description: Single year (e.g. 2022) - empty for all years | |
| soundscape_aggregation: | |
| description: Time aggregration | |
| type: choice | |
| default: 'time_of_day' | |
| options: | |
| - 'time_of_day' | |
| - 'day_of_month' | |
| - 'day_of_year' | |
| - 'month_in_year' | |
| - 'day_of_week' | |
| - 'year' | |
| required: true | |
| soundscape_bin_size: | |
| description: Bin size/bandwidth (Hz) | |
| type: choice | |
| default: '344' | |
| options: | |
| - '344' | |
| - '172' | |
| - '86' | |
| - '43' | |
| - '21' | |
| required: true | |
| soundscape_normalize: | |
| description: Normalize results | |
| type: choice | |
| default: '1' | |
| options: | |
| - '1' | |
| - '0' | |
| required: true | |
| soundscape_threshold: | |
| description: Peak filtering amplitude threshold | |
| default: '0.05' | |
| required: true | |
| environment: | |
| description: Environment (namespace) | |
| type: choice | |
| default: 'production' | |
| options: | |
| - 'production' | |
| - 'staging' | |
| - 'testing' | |
| required: true | |
| jobs: | |
| create-job: | |
| runs-on: deployment-runner | |
| env: | |
| ECR_REGISTRY: '887044485231.dkr.ecr.eu-west-1.amazonaws.com' | |
| ECR_REPO: 'arbimon-soundscapes' | |
| JOB_NAME: 'arbimon-soundscape' | |
| steps: | |
| - name: 'Setup: Generate job unique number' | |
| run: echo "JOB_NUMBER=$(date +%s)" >> $GITHUB_ENV | |
| - name: 'Deploy: Generate job definition file' | |
| run: | | |
| cat <<EOF > job.yaml | |
| apiVersion: batch/v1 | |
| kind: Job | |
| metadata: | |
| name: ${{ env.JOB_NAME }}-${{ env.JOB_NUMBER }} | |
| spec: | |
| ttlSecondsAfterFinished: 86400 | |
| template: | |
| spec: | |
| containers: | |
| - name: ${{ env.JOB_NAME }} | |
| image: ${{ env.ECR_REGISTRY }}/${{ env.ECR_REPO }}:latest | |
| imagePullPolicy: Always | |
| args: ["batch_legacy"] | |
| envFrom: | |
| - secretRef: | |
| name: arbimon-soundscapes-secret | |
| - configMapRef: | |
| name: arbimon-soundscapes-config | |
| env: | |
| - name: PROJECT | |
| value: '${{ inputs.project }}' | |
| - name: SITES | |
| value: '${{ inputs.sites }}' | |
| - name: YEAR | |
| value: '${{ inputs.year }}' | |
| - name: SOUNDSCAPE_AGGREGATION | |
| value: '${{ inputs.soundscape_aggregation }}' | |
| - name: SOUNDSCAPE_BIN_SIZE | |
| value: '${{ inputs.soundscape_bin_size }}' | |
| - name: SOUNDSCAPE_NORMALIZE | |
| value: '${{ inputs.soundscape_normalize }}' | |
| - name: SOUNDSCAPE_THRESHOLD | |
| value: '${{ inputs.soundscape_threshold }}' | |
| resources: | |
| requests: | |
| ephemeral-storage: '20Gi' | |
| restartPolicy: Never | |
| backoffLimit: 0 | |
| EOF | |
| cat job.yaml | |
| - name: 'Deploy: Create job' | |
| # v1 (1.21.2) @ 03 Nov 2021 https://github.com/actions-hub/kubectl/tags | |
| uses: actions-hub/kubectl@365773786ebd92c7b36b6ab80e17d4a213ab0cd1 | |
| env: | |
| KUBE_CONFIG: ${{ secrets.KUBE_CONFIG_SUPER }} | |
| with: | |
| args: apply -f job.yaml -n ${{ inputs.environment }} |