Create batch run #5
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| name: 'Create batch run' | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| project: | |
| description: Project identifier (core or arbimon) or url slug (e.g. puerto-rico-island-wide) | |
| required: true | |
| sites: | |
| description: Comma-separated list of site names including wildcards (e.g. AB2,AB3,CD*) - empty for all sites | |
| year: | |
| description: Single year (e.g. 2022) - empty for all years | |
| soundscape_aggregation: | |
| description: Time aggregration | |
| type: choice | |
| default: 'time_of_day' | |
| options: | |
| - 'time_of_day' | |
| # - 'day_of_month' | |
| # - 'day_of_year' | |
| # - 'month_in_year' | |
| # - 'day_of_week' | |
| # - 'year' | |
| required: true | |
| soundscape_bin_size: | |
| description: Bin size/bandwidth (Hz) | |
| type: choice | |
| default: '344' | |
| options: | |
| - '344' | |
| # - '172' | |
| # - '86' | |
| # - '43' | |
| # - '21' | |
| required: true | |
| soundscape_normalize: | |
| description: Normalize results | |
| type: choice | |
| default: '1' | |
| options: | |
| - '1' | |
| # - '0' | |
| required: true | |
| soundscape_threshold: | |
| description: Peak filtering amplitude threshold | |
| default: '0.05' | |
| required: true | |
| environment: | |
| description: Environment (namespace) | |
| type: choice | |
| default: 'production' | |
| options: | |
| - 'production' | |
| - 'staging' | |
| - 'testing' | |
| required: true | |
| jobs: | |
| create-job: | |
| runs-on: deployment-runner | |
| env: | |
| ECR_REGISTRY: '887044485231.dkr.ecr.eu-west-1.amazonaws.com' | |
| ECR_REPO: 'arbimon-soundscapes' | |
| JOB_NAME: 'arbimon-soundscape' | |
| steps: | |
| - name: 'Setup: Generate job unique number' | |
| run: echo "JOB_NUMBER=$(date +%s)" >> $GITHUB_ENV | |
| - name: 'Deploy: Generate job definition file' | |
| run: | | |
| cat <<EOF > job.yaml | |
| apiVersion: batch/v1 | |
| kind: Job | |
| metadata: | |
| name: ${{ env.JOB_NAME }}-${{ env.JOB_NUMBER }} | |
| spec: | |
| ttlSecondsAfterFinished: 86400 | |
| template: | |
| spec: | |
| containers: | |
| - name: ${{ env.JOB_NAME }} | |
| image: ${{ env.ECR_REGISTRY }}/${{ env.ECR_REPO }}:latest | |
| imagePullPolicy: Always | |
| args: ["batch_legacy"] | |
| envFrom: | |
| - secretRef: | |
| name: arbimon-soundscapes-secret | |
| - configMapRef: | |
| name: arbimon-soundscapes-config | |
| env: | |
| - name: PROJECT | |
| value: '${{ inputs.project }}' | |
| - name: SITES | |
| value: '${{ inputs.sites }}' | |
| - name: YEAR | |
| value: '${{ inputs.year }}' | |
| - name: SOUNDSCAPE_AGGREGATION | |
| value: '${{ inputs.soundscape_aggregation }}' | |
| - name: SOUNDSCAPE_BIN_SIZE | |
| value: '${{ inputs.soundscape_bin_size }}' | |
| - name: SOUNDSCAPE_NORMALIZE | |
| value: '${{ inputs.soundscape_normalize }}' | |
| - name: SOUNDSCAPE_THRESHOLD | |
| value: '${{ inputs.soundscape_threshold }}' | |
| restartPolicy: Never | |
| backoffLimit: 0 | |
| EOF | |
| cat job.yaml | |
| - name: 'Deploy: Create job' | |
| # v1 (1.21.2) @ 03 Nov 2021 https://github.com/actions-hub/kubectl/tags | |
| uses: actions-hub/kubectl@365773786ebd92c7b36b6ab80e17d4a213ab0cd1 | |
| env: | |
| KUBE_CONFIG: ${{ secrets.KUBE_CONFIG_SUPER }} | |
| with: | |
| args: apply -f job.yaml -n ${{ inputs.environment }} |