NBAMSeq

NBAMSeq is a Bioconductor package for differential expression analysis based on negative binomial additive model.

The Bioconductor package can be found here.
The Bioconductor package vignette can be found here.
The NBAMSeq paper can be found here.

Package installation

if (!requireNamespace("BiocManager", quietly = TRUE))  install.packages("BiocManager")    
BiocManager::install("NBAMSeq")    

Citation

Ren, X., & Kuan, P. F. (2020). Negative binomial additive model for RNA-Seq data analysis. BMC Bioinformatics, 21(1), 1-15.

@article{ren2020negative,
title={Negative binomial additive model for RNA-Seq data analysis},
author={Ren, Xu and Kuan, Pei-Fen},
journal={BMC Bioinformatics},
volume={21},
number={1},
pages={1--15},
year={2020},
publisher={BioMed Central}
}