Demo example of plotting a tubes plot for a model #2344
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build and deploy docs | |
| on: | |
| pull_request: | |
| push: | |
| branches: [main] | |
| tags: | |
| - '*' | |
| jobs: | |
| build-deploy-docs: | |
| # Only run this job on the popsim-consortium repository. | |
| # The job would fail on forks anyhow, because the secret used below | |
| # POPSIMBOT_STDPOPSIM_DOCS_TOKEN | |
| # won't be valid. But to avoid confusion, we explicitly restrict the scope. | |
| # See https://github.com/popsim-consortium/stdpopsim/issues/662 | |
| if: github.repository == 'popsim-consortium/stdpopsim' | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.8 | |
| - name: Install deps | |
| run: | | |
| python -m pip install wheel | |
| python -m pip install numpy==1.19.2 # for scikit-allel | |
| python -m pip install -r requirements/CI/requirements.txt | |
| # Install the local package so that stdpopsim is in the path, | |
| # which is needed for generating docs `command-output`. | |
| python -m pip install . | |
| - name: Build Docs | |
| run: make -C docs | |
| - name: Checkout docs site | |
| if: (!github.event.pull_request) | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: popsim-consortium/stdpopsim-docs | |
| token: ${{ secrets.POPSIMBOT_STDPOPSIM_DOCS_TOKEN }} | |
| path: stdpopsim-docs | |
| - name: Copy our docs to the tag specific location | |
| if: (!github.event.pull_request) | |
| run: | | |
| cd stdpopsim-docs | |
| export DEST=`echo ${GITHUB_REF} | sed -e "s/refs\/heads\///g" | sed -e "s/refs\/tags\///g"` | |
| rm -rf $DEST | |
| cp -r ../docs/_build/html $DEST | |
| - name: Commit and push the docs | |
| if: (!github.event.pull_request) | |
| run: | | |
| cd stdpopsim-docs | |
| git config user.name PopSim-bot | |
| git config user.email graham.gower+popsim-bot@gmail.com | |
| git add . | |
| git diff-index --quiet HEAD || git commit -m "Automated doc build for ${GITHUB_REF}" | |
| git push |