chore: mix of urls and local files for species #43
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| name: Build indexed genome references | |
| on: | |
| pull_request: | |
| types: [opened, reopened, synchronize] | |
| branches: | |
| - "main" | |
| paths: | |
| - "genomeFiles/package.json" | |
| - ".github/workflows/build-genome-assets.yaml" | |
| push: | |
| branches: | |
| - "main" | |
| paths: | |
| - "genomeFiles/package.json" | |
| - ".github/workflows/build-genome-assets.yaml" | |
| workflow_dispatch: {} | |
| jobs: | |
| init: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: milaboratory/github-ci/actions/context/init@v4 | |
| with: | |
| version-canonize: false | |
| branch-versioning: main | |
| - uses: milaboratory/github-ci/actions/context@v4 | |
| id: ctx | |
| outputs: | |
| is-release: ${{ steps.ctx.outputs.is-release }} | |
| run: | |
| needs: | |
| - init | |
| uses: milaboratory/github-ci/.github/workflows/node-simple.yaml@v4-beta | |
| with: | |
| gha-runner-label: 'ubuntu-2xlarge-amd64' | |
| app-name: SMART-indexed genome assets | |
| app-name-slug: "smart-indexed-genome-assets" | |
| notify-telegram: true | |
| node-version: "20.x" | |
| node-execution-path: "genomeFiles" | |
| is-electron-application: "false" | |
| always-auth: "true" | |
| registry-url: "https://registry.npmjs.org" | |
| build-script-name: ${{ needs.init.outputs.is-release == 'true' && 'build-skip' || 'build' }} | |
| test: false | |
| publish-to-public: true | |
| aws-login-enable: true | |
| aws-login-duration: 43199 | |
| gcp-login-enable: true | |
| npmrc-config: | | |
| { | |
| "registries": { | |
| "https://registry.npmjs.org/": { | |
| "scopes": ["platforma-open"], | |
| "tokenVar": "NPMJS_TOKEN" | |
| } | |
| } | |
| } | |
| secrets: | |
| env: | | |
| { | |
| "PL_REGISTRY_PLATFORMA_OPEN_UPLOAD_URL": ${{ toJSON(secrets.PL_REGISTRY_PLOPEN_UPLOAD_URL) }}, | |
| "NPMJS_TOKEN": ${{ toJSON(secrets.NPMJS_TOKEN) }} | |
| } | |
| AWS_ASSUME_ROLE: ${{ secrets.AWS_CI_IAM_MONOREPO_SIMPLE_ROLE }} | |
| AWS_ASSUME_REGION: "eu-central-1" | |
| GCP_KMS_WORKLOAD_IDENTITY_PROVIDER: ${{ secrets.GCP_KMS_WORKLOAD_IDENTITY_PROVIDER }} | |
| GCP_KMS_SERVICE_ACCOUNT: ${{ secrets.GCP_KMS_SERVICE_ACCOUNT }} | |
| GCP_KMS_LOCATION: ${{ secrets.GCP_KMS_LOCATION }} | |
| GCP_KMS_KEYRING: ${{ secrets.GCP_KMS_KEYRING }} | |
| GCP_KMS_KEY_NAME: ${{ secrets.GCP_KMS_KEY_NAME }} | |
| TELEGRAM_NOTIFICATION_TARGET: ${{ secrets.TG_CHANNEL_MIBUILDS }} | |
| TELEGRAM_API_TOKEN: ${{ secrets.TG_CI_BOT_TOKEN }} |