Fix typo. #6
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| name: phyloDB CI tests | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| services: | |
| neo4j: | |
| image: neo4j:5.13.0-community | |
| env: | |
| NEO4J_AUTH: neo4j/password | |
| NEO4J_dbms_memory_pagecache_size: 1G | |
| NEO4J_dbms.memory.heap.initial_size: 2G | |
| NEO4J_dbms_memory_heap_max__size: 2G | |
| NEO4J_dbms_security_procedures_unrestricted: apoc.*,algorithms.* | |
| NEO4J_dbms_security_procedures_whitelist: apoc.*,algorithms.* | |
| NEO4J_dbms_connector_bolt_advertised__address: localhost:7687 | |
| NEO4JLABS_PLUGINS: '["apoc", "apoc-extended"]' | |
| volumes: | |
| - /home/runner/work/phyloDB/instance/plugins:/var/lib/neo4j/plugins | |
| ports: | |
| - 7687:7687 | |
| options: --name neo4j | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up JDK 17 | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '17' | |
| distribution: 'temurin' | |
| - name: Build and test | |
| run: | | |
| cd algorithms | |
| mvn -q package | |
| sudo cp target/algorithms-1.0.jar /home/runner/work/phyloDB/instance/plugins | |
| sudo ls -l /home/runner/work/phyloDB/instance/plugins | |
| docker restart neo4j | |
| mvn -q test | |
| cd ../phylodb | |
| ./gradlew test --tests pt.ist.meic.phylodb.unit* |