Skip to content

Navigation Menu

ohsu-comp-bio

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Oregon Health and Science University Computational Biology

16 followers
Portland, OR
http://www.ohsu.edu/compbio

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

funnel funnel Public

Funnel is a toolkit for distributed task execution via a simple, standard API.

Go 121 32
tesseract tesseract Public

Python lib for remote code execution via the GA4GH TES API

Python 7
g2p-aggregator g2p-aggregator Public

Associations of genomic features, drugs and diseases

HTML 48 11

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All ApacheConf C++ CSS Dockerfile GLSL Go Groovy HTML Java JavaScript Jupyter Notebook Markdown MATLAB Nextflow Perl PHP PLpgSQL Protocol Buffer Python R Ruby Scala Shell TSQL Web Ontology Language

Sort

Select order

Last updated Name Stars

Showing 10 of 198 repositories

funnel Public
Funnel is a toolkit for distributed task execution via a simple, standard API.

ohsu-comp-bio/funnel’s past year of commit activity

Go 121 MIT 32 106 (1 issue needs help) 5 Updated Nov 27, 2024
helm-charts Public
Helm Charts for deploying various projects in Kubernetes!

ohsu-comp-bio/helm-charts’s past year of commit activity

0 0 0 0 Updated Nov 23, 2024
vrs-annotator Public
Annotates VCF Variants with VRS IDs

ohsu-comp-bio/vrs-annotator’s past year of commit activity

Jupyter Notebook 1 3 0 0 Updated Nov 22, 2024
compbio-galaxy-wrappers Public
OHSU Galaxy wrappers.

ohsu-comp-bio/compbio-galaxy-wrappers’s past year of commit activity

Python 6 11 0 1 Updated Nov 12, 2024
seqrepo-rest-service Public Forked from biocommons/seqrepo-rest-service
OpenAPI-based REST interface to biological sequences and sequence metadata

ohsu-comp-bio/seqrepo-rest-service’s past year of commit activity

Python 0 Apache-2.0 6 0 0 Updated Nov 6, 2024
py-tes Public
Python SDK for the GA4GH Task Execution API

ohsu-comp-bio/py-tes’s past year of commit activity

Python 5 MIT 10 17 2 Updated Nov 5, 2024
fence-multipart Public Forked from uc-cdis/fence
AuthN/AuthZ OIDC Service

ohsu-comp-bio/fence-multipart’s past year of commit activity

Python 0 Apache-2.0 48 0 0 Updated Oct 30, 2024
syntheVAEiser Public

ohsu-comp-bio/syntheVAEiser’s past year of commit activity

Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Oct 18, 2024
.github Public

ohsu-comp-bio/.github’s past year of commit activity

0 0 0 0 Updated Oct 14, 2024
docker-centos-slurm Public archive Forked from giovtorres/docker-centos6-slurm
Slurm Docker Container on CentOS 7

ohsu-comp-bio/docker-centos-slurm’s past year of commit activity

Shell 0 MIT 4 0 0 Updated Oct 1, 2024

View all repositories

People

Top languages

Loading…

Most used topics

Loading…

Footer

© 2024 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.