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Docker to run rMATS for splicing quantification and analysis

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Name		Name	Last commit message	Last commit date
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Dockerfile		Dockerfile
README.md		README.md
STAR-2.5.3a.tar.bz2		STAR-2.5.3a.tar.bz2
get-pip.py		get-pip.py
rMATS.3.2.5.tar.bz2		rMATS.3.2.5.tar.bz2
samtools-1.5.tar.bz2		samtools-1.5.tar.bz2

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rMATS (Docker)

Docker to run rMATS for splicing quantification and analysis

Available software

rMATS 3.2.5 (run using command RNASeq-MATS.py)
samtools 1.5
STAR 2.5.3a
python 2.7

Maintainer

Nuno Agostinho - Nuno Morais Lab, iMM (2017)

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Docker to run rMATS for splicing quantification and analysis

docker alternative-splicing splicing-quantification rmats

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Docker for rMATS 3.2.5 Latest

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