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Adding neural network inference to NMMA #370

Merged
merged 112 commits into from
Jul 18, 2024
Merged

Adding neural network inference to NMMA #370

merged 112 commits into from
Jul 18, 2024

Commits on May 7, 2024

  1. Update analysis.py 

    changed main to have a neural net option
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  2. Update analysis.py 

    started adding nn analysis function
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  3. Create embedding.py

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  4. Create resnet.py

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  5. Create normalizingflows.py

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  6. Create dataprocessing.py

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Commits on May 9, 2024

  1. Update analysis.py

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Commits on May 21, 2024

  1. Update analysis.py

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Commits on Jun 25, 2024

  1. Update analysis.py 

    indentation error
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  2. Update analysis.py 

    added missing colon
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  3. Update analysis.py 

    added print statements
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  4. Update analysis.py 

    fixed indentation
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  5. Update analysis.py 

    commented out code for debugging
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  6. Update analysis.py 

    removed all added code
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  7. Merge branch 'nuclear-multimessenger-astronomy:main' into main

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  8. Update analysis.py 

    adding print statements
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Commits on Jun 26, 2024

  1. Update analysis.py 

    changed logic in def main
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  2. Update normalizingflows.py 

    defined num points
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  3. Update analysis.py 

    added missing colon
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  4. Update analysis.py 

    changed main function
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  5. Update analysis.py 

    uncommented filter requirements
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  6. Update analysis.py 

    added print statement
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  7. Update analysis.py 

    added dt logic
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  8. Update analysis.py 

    set up logger and outdir
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  9. Update analysis.py 

    changed tmin tmax logic
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  10. Update analysis.py 

    added tmin, tmax, num points, current points
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  11. Update analysis.py 

    adding injection file option
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  12. Update analysis.py 

    changed print statement
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Commits on Jul 2, 2024

  1. Update analysis.py 

    fixed typo
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  2. Update analysis.py 

    light curve generation
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  3. Update analysis.py 

    adding print statements
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  4. Update analysis.py 

    missing parenthesis
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  5. Update analysis.py 

    added point specification
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  6. Update analysis.py 

    creating dataframe
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  7. Update analysis.py 

    formatting data into df needed for further analysis
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  8. Update analysis.py 

    fixed indentation
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  9. Update analysis.py 

    debugging
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  10. Update analysis.py 

    debugging
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  11. Update analysis.py

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  12. Update analysis.py 

    debugging
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  13. Update analysis.py 

    making df
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  14. Update analysis.py 

    fixed syntax error
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  15. Update analysis.py 

    added detection limit arg logic
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Commits on Jul 3, 2024

  1. Update analysis.py 

    made pre padding dict and df
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  2. Update analysis.py 

    syntax error
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  3. Update analysis.py 

    checking padding functionality
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  4. Update dataprocessing.py 

    made filler functions more flexible to other dataframes, removed column hardcoding
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  5. Update analysis.py 

    importing padding functions
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  6. added mlmodel

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  7. Delete mlmodel directory 

    delete copy
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  8. Update analysis.py 

    importing data processing functions
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  9. Update requirements.txt 

    added nflows package
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Commits on Jul 9, 2024

  1. Update requirements.txt 

    added nflows, torch
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Commits on Jul 11, 2024

  1. Update dataprocessing.py 

    change variable names
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  2. Update analysis.py 

    finished data padding
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  3. Update requirements.txt

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  4. Update requirements.txt

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  5. Update requirements.txt 

    can't install torch
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Commits on Jul 15, 2024

  1. Update requirements.txt 

    reverted back to original requirements
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  2. Update analysis.py 

    added imports
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  3. Update analysis.py 

    importing resnet
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  4. Update analysis.py 

    importing more functions
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  5. Update analysis.py 

    added functionality for inference
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  6. Create inference.py

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  7. Update analysis.py 

    added more checks and arg functionality
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  8. Update analysis.py 

    added functionality if injection parameters are provided
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  9. Update inference.py 

    added functionality if truth is not available.
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  10. Update inference.py 

    fixed syntax error
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  11. Update inference.py 

    fixed variable name error
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  12. Update analysis.py

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  13. Update dataprocessing.py

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  14. Update embedding.py

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  15. Update normalizingflows.py

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  16. Update analysis.py 

    fixed syntax error
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  17. Update analysis.py 

    made column list an arg of pad the data func
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  18. Update dataprocessing.py 

    made column list an arg for padding functions
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  19. Update analysis.py 

    added print statements
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  20. Update analysis.py

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  21. Add files via upload 

    adding similarity embedding weights
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  22. Add files via upload 

    normalizing flow weights
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  23. Update analysis.py 

    updated weights filepath
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  24. Update analysis.py 

    added context features
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Commits on Jul 16, 2024

  1. Update analysis.py 

    added flow
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  2. Update analysis.py 

    typo in flow weight path
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  3. Update analysis.py 

    fixed logic
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  4. Update analysis.py 

    saving corner plot
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  5. Update analysis.py 

    more savefig args added
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  6. Update analysis.py 

    debugging save plot issue
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  7. Update analysis.py 

    import matplotlib pyplot
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  8. Update analysis.py 

    trying to save figure
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  9. Update analysis.py 

    fixed savepath
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  10. Update analysis.py

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  11. Update analysis.py 

    removing print statements
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  12. Update analysis.py 

    making sure filters is defined
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  13. Update analysis.py

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  14. Update analysis.py

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  15. Update analysis.py

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  16. Update analysis.py 

    debugging
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  17. Update analysis.py 

    adding exceptions
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  18. Update analysis.py

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Commits on Jul 17, 2024

  1. Create ml_requirements.txt

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  2. Create lfi_analysis.md

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  3. Update lfi_analysis.md 

    added cli examples
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  4. Update lfi_analysis.md 

    added instructions for setting up env
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  5. Update analysis.py 

    added test function for nn_analysis
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  6. Update continous_integration.yml

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  7. Update continous_integration.yml

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  8. Update analysis.py

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  9. add lfi to toctree

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Commits on Jul 18, 2024

  1. local_only to False in nn

    @sahiljhawar
    sahiljhawar authored Jul 18, 2024
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  2. add injection file and injection path

    @sahiljhawar
    sahiljhawar committed Jul 18, 2024
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  3. update pyproject and add torchvision to req

    @sahiljhawar
    sahiljhawar committed Jul 18, 2024
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