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Template merge 2.10 #187

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Template merge 2.10 #187

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3f4c494
Template update for nf-core/tools version 2.9
Jul 5, 2023
91f706e
fix template conflict merge
Sep 28, 2023
7c71c4a
linting
Sep 28, 2023
e1587bd
prettier
Sep 28, 2023
7213ca2
removed duplicated version
Sep 28, 2023
6dd09ab
linting
Sep 28, 2023
b66ed9a
prettier
Sep 28, 2023
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4 changes: 2 additions & 2 deletions assets/multiqc_config.yml
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Original file line number Diff line number Diff line change
@@ -1,9 +1,9 @@
report_comment: >

This report has been generated by the <a href="https://github.com/nf-core/metatdenovo/releases/tag/2.5.1" target="_blank">nf-core/metatdenovo</a>
analysis pipeline. For information about how to interpret these results, please see the
<a href="https://nf-co.re/metatdenovo/2.5.1/docs/output" target="_blank">documentation</a>.

report_section_order:
"nf-core-metatdenovo-methods-description":
order: -1000
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5 changes: 5 additions & 0 deletions nextflow_schema.json
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Expand Up @@ -167,12 +167,14 @@
"type": "boolean",
"description": "Display help text.",
"fa_icon": "fas fa-question-circle",
"default": false,
"hidden": true
},
"version": {
"type": "boolean",
"description": "Display version and exit.",
"fa_icon": "fas fa-question-circle",
"default": false,
"hidden": true
},
"publish_dir_mode": {
Expand All @@ -196,6 +198,7 @@
"type": "boolean",
"description": "Send plain-text email instead of HTML.",
"fa_icon": "fas fa-remove-format",
"default": false,
"hidden": true
},
"max_multiqc_email_size": {
Expand All @@ -210,6 +213,7 @@
"type": "boolean",
"description": "Do not use coloured log outputs.",
"fa_icon": "fas fa-palette",
"default": false,
"hidden": true
},
"hook_url": {
Expand Down Expand Up @@ -248,6 +252,7 @@
"type": "boolean",
"fa_icon": "far fa-eye-slash",
"description": "Show all params when using `--help`",
"default": false,
"hidden": true,
"help_text": "By default, parameters set as _hidden_ in the schema are not shown on the command line when a user runs with `--help`. Specifying this option will tell the pipeline to show all parameters."
},
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