Skeleton of a pipeline to explore parameters and store images #1
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…g-automation into dev
…g-automation into dev
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Description
What is this PR
Why is this PR needed?
Get early feedback on ideas on how to keep track on the impart of different parameters in calcium imaging algorithm development.
What does this PR do?
Adds the skeleton of a possible pipeline that reads tiffs in a given location, sets saving paths with Neuroblueprint formatting, tracks parameters with mlflow and links related processed images. At this stage artefacts and metrics are mocks.
References
TODO
How has this PR been tested?
TODO
Is this a breaking change?
No
Does this PR require an update to the documentation?
TODO
Checklist: