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Update core #168

Merged
merged 28 commits into from
Sep 12, 2023
Merged

Update core #168

merged 28 commits into from
Sep 12, 2023

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ChrisJones687
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@ChrisJones687 ChrisJones687 commented Aug 29, 2023 •
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Pull request to add new features from PoPS core. Current to do:

  • Soils
  • Probablistic Weather
  • Quarantine Direction
  • Seperate RNG Seeds

ChrisJones687 and others added 28 commits May 3, 2023 08:59
@ChrisJones687
update core
986c9a9
@ChrisJones687
update files without interface changes
0ee61d6
@ChrisJones687
update r and cpp functions to handle new parameters in pops core config
5ca6ec1
@petrasovaa
Add quarantine direction parameter from pops-core
05f6dc4
@ChrisJones687
update .hpp files from pops core
3ef42ec
@ChrisJones687
Merge remote-tracking branch 'origin/main' into update_core
969361c
@ChrisJones687
Merge remote-tracking branch 'origin/add-quarantine-directions' into …
976b360 
…update_core
@ChrisJones687
update submodule
2fd28af
@ChrisJones687
remove pops-core submodule due to submodule error.
044e00f
@ChrisJones687
update pops-core submodule
84c8fb0
@ChrisJones687
updated cpp core
088486d
@ChrisJones687
update pops core. Need to update rpops functions.
49fb2fe
@ChrisJones687
add random seeds params to pops.cpp
e339a1d
@ChrisJones687
update cpp
8232949
@ChrisJones687
update cpp
3d575f8
@ChrisJones687
add random seeds to pops_model.R wrapper for cpp function
35efead
@ChrisJones687
add checks, errors, and lists for random seeds
96835cd
@ChrisJones687
update config to handle random seeds
d0b3c8f
@ChrisJones687
added random seeds to pops r functions
0877b59
@ChrisJones687
fix random seeds creation and useage
edf551c
@ChrisJones687
update pops cpp function to handle weather sd with probabilistic draws
724540c
@ChrisJones687
add temp and precip sd to r functions
5e22264
@ChrisJones687
add random seed file for testing
0c27e8d
@ChrisJones687
update tests
37dc750
@ChrisJones687
update description
e73293e
@ChrisJones687
add soils file and use soils to all r functions.
7adae19
@ChrisJones687
remove c++ 11 flag
0fcbdc2
@ChrisJones687
update config tests to have soils
c6f841a
@ChrisJones687 ChrisJones687 marked this pull request as ready for review September 12, 2023 16:24
@ChrisJones687 ChrisJones687 merged commit a0f2680 into main Sep 12, 2023
2 of 5 checks passed
@ChrisJones687 ChrisJones687 deleted the update_core branch September 12, 2023 16:26
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2 participants
@ChrisJones687 @petrasovaa