Update run_param_config.py

Adding MSK/CMO Bait/Target set to table
mskcc · Feb 5, 2024 · 4ad6fc6 · 4ad6fc6
1 parent 15504d4
commit 4ad6fc6
Showing 1 changed file with 12 additions and 0 deletions.
diff --git a/scripts/run_param_config.py b/scripts/run_param_config.py
@@ -651,6 +651,18 @@ def get_ordered_dic(unordered_dic):
 				MSKQ: "no",
 				MD: "yes"
 		},
+		"MSK-CH": {
+				BAITS: "/igo/home/igo/resources/ilist/hg38/CMO-CH/CMO-CH.hg38.baits",
+				TARGETS: "/igo/home/igo/resources/ilist/hg38/CMO-CH/CMO-CH.hg38.targets",
+				MSKQ: "no",
+				MD: "yes"
+		},
+		"CMO-CH": {
+				BAITS: "/igo/home/igo/resources/ilist/hg38/CMO-CH/CMO-CH.hg38.baits",
+				TARGETS: "/igo/home/igo/resources/ilist/hg38/CMO-CH/CMO-CH.hg38.targets",
+				MSKQ: "no",
+				MD: "yes"
+		},
 		"HumanWholeGenome": {
 				MSKQ: "no",
 				MD: "yes",