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Update mobie io dependency
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@tischi
tischi committed Sep 22, 2023
1 parent ff77c80 commit d549662
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6 changes: 3 additions & 3 deletions pom.xml
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<groupId>org.embl.mobie</groupId>
<artifactId>mobie-viewer-fiji</artifactId>
<version>4.0.7-SNAPSHOT</version>
<version>4.1.0-SNAPSHOT</version>

<!-- force javadoc generation to fetch errors: -->
<!-- mvn javadoc:javadoc | grep error -->
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<scm>
<connection>scm:git:https://github.com/mobie/mobie-viewer-fiji</connection>
<developerConnection>scm:git:git@github.com:mobie/mobie-viewer-fiji</developerConnection>
<tag>mobie-viewer-fiji-3.0.9</tag>
<tag>mobie-viewer-fiji-4.0.7</tag>
<url>https://github.com/mobie/mobie-viewer-fiji</url>
</scm>
<issueManagement>
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<bigdataviewer-playground.version>0.8.0</bigdataviewer-playground.version>
<imagej-utils.version>0.6.9</imagej-utils.version>
<mobie-io.version>2.2.0</mobie-io.version>
<mobie-io.version>2.2.1</mobie-io.version>
<trove.version>1.0.2</trove.version>
<annotations.version>16.0.2</annotations.version>

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248 changes: 248 additions & 0 deletions pom.xml.releaseBackup
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<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>org.scijava</groupId>
<artifactId>pom-scijava</artifactId>
<version>36.0.0</version>
</parent>

<groupId>org.embl.mobie</groupId>
<artifactId>mobie-viewer-fiji</artifactId>
<version>4.0.7-SNAPSHOT</version>

<!-- force javadoc generation to fetch errors: -->
<!-- mvn javadoc:javadoc | grep error -->
<!-- ../scijava-scripts/release-version.sh - -skip-version-check - -skip-license-update -->
<!-- mvn install -Dmaven.test.skip=true -Dscijava.app.directory=/Users/tischer/Desktop/Fiji/Fiji-MoBIE-beta.app -->
<!-- mvn clean install -Dmaven.test.skip=true -Dscijava.app.directory=/Users/tischer/Desktop/Fiji/Fiji-MoBIE.app -->
<!-- ../scijava-scripts/release-version.sh - -skip-version-check - -skip-license-update -->

<url>https://github.com/mobie/mobie-viewer-fiji</url>
<name>MoBIE Fiji Viewer</name>
<description>Fiji viewer for MoBIE projects</description>
<inceptionYear>2018</inceptionYear>
<organization>
<name>EMBL</name>
<url>http://embl.de/</url>
</organization>
<licenses>
<license>
<name>Simplified BSD License</name>
<distribution>repo</distribution>
</license>
</licenses>
<developers>
<developer>
<id>tischi</id>
<name>Christian Tischer</name>
<roles>
<role>lead</role>
<role>developer</role>
<role>debugger</role>
<role>reviewer</role>
<role>support</role>
<role>maintainer</role>
</roles>
</developer>
</developers>
<contributors>
<contributor>
<name>Kimberly Meechan</name>
<roles>
<role>developer</role>
<role>debugger</role>
<role>reviewer</role>
<role>support</role>
</roles>
</contributor>
</contributors>
<mailingLists>
<mailingList>
<name>Image.sc Forum</name>
<archive>https://forum.image.sc/</archive>
</mailingList>
</mailingLists>
<scm>
<connection>scm:git:https://github.com/mobie/mobie-viewer-fiji</connection>
<developerConnection>scm:git:git@github.com:mobie/mobie-viewer-fiji</developerConnection>
<tag>mobie-viewer-fiji-3.0.9</tag>
<url>https://github.com/mobie/mobie-viewer-fiji</url>
</scm>
<issueManagement>
<system>GitHub</system>
<url>https://github.com/mobie/mobie-viewer-fiji/issues</url>
</issueManagement>
<ciManagement>
<system>Github Actions</system>
<url>https://github.com/mobie/mobie-viewer-fiji/actions</url>
</ciManagement>
<properties>
<package-name>de.embl.cba.mobie</package-name>
<license.licenseName>bsd_2</license.licenseName>
<license.copyrightOwners>EMBL</license.copyrightOwners>
<enforcer.skip>true</enforcer.skip>

<bigdataviewer-playground.version>0.8.0</bigdataviewer-playground.version>
<imagej-utils.version>0.6.9</imagej-utils.version>
<mobie-io.version>2.2.0</mobie-io.version>
<trove.version>1.0.2</trove.version>
<annotations.version>16.0.2</annotations.version>

<!-- Version 1.6.0-scijava-3-SNAPSHOT of j3dcore addresses a minor issue
https://github.com/fiji/3D_Viewer/issues/26
1.6.0-scijava-3-SNAPSHOT is not released on any repository,
so you'd have to build it locally from https://github.com/scijava/java3d-core
Alternatively, as the fix included in 1.6.0-scijava-3-SNAPSHOT is not critical,
the easiest is to use version 1.6.0-scijava-2 instead, which is available
on a central repository.
-->
<j3dcore.version>1.6.0-scijava-2</j3dcore.version>

<!-- TableSaw -->
<tablesaw-core.version>0.43.1</tablesaw-core.version>
<tablesaw-parquet.version>0.10.0</tablesaw-parquet.version>

<!-- NB: Deploy releases to the SciJava Maven repository. -->
<releaseProfiles>sign,deploy-to-scijava</releaseProfiles>

</properties>

<repositories>
<repository>
<id>scijava.public</id>
<url>https://maven.scijava.org/content/groups/public</url>
</repository>
</repositories>
<dependencies>
<dependency>
<groupId>net.imagej</groupId>
<artifactId>imagej-legacy</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>bigdataviewer-playground</artifactId>
<version>${bigdataviewer-playground.version}</version>
<exclusions>
<exclusion>
<groupId>net.imagej</groupId>
<artifactId>imagej</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2</artifactId>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2-cache</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>bigdataviewer-core</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>bigdataviewer-vistools</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>spim_data</artifactId>
</dependency>
<dependency>
<groupId>org.embl.mobie</groupId>
<artifactId>mobie-io</artifactId>
<version>${mobie-io.version}</version>
</dependency>
<!-- <dependency>-->
<!-- <groupId>org.janelia.saalfeldlab</groupId>-->
<!-- <artifactId>n5-aws-s3</artifactId>-->
<!-- </dependency>-->
<!-- <dependency>-->
<!-- <groupId>org.janelia.saalfeldlab</groupId>-->
<!-- <artifactId>n5-imglib2</artifactId>-->
<!-- </dependency>-->
<!-- <dependency>-->
<!-- <groupId>org.janelia.saalfeldlab</groupId>-->
<!-- <artifactId>n5-blosc</artifactId>-->
<!-- </dependency>-->
<dependency>
<!-- https://github.com/fiji/3D_Viewer/pull/33#event-8572718504 -->
<groupId>sc.fiji</groupId>
<artifactId>3D_Viewer</artifactId>
<version>4.0.5</version>
</dependency>
<dependency>
<groupId>org.scijava</groupId>
<artifactId>j3dcore</artifactId>
</dependency>
<dependency>
<groupId>de.embl.cba</groupId>
<artifactId>imagej-utils</artifactId>
<version>${imagej-utils.version}</version>
<exclusions>
<exclusion>
<groupId>net.imagej</groupId>
<artifactId>imagej</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.jetbrains</groupId>
<artifactId>annotations</artifactId>
<version>${annotations.version}</version>
</dependency>
<dependency>
<groupId>com.formdev</groupId>
<artifactId>flatlaf</artifactId>
</dependency>
<dependency>
<groupId>net.imagej</groupId>
<artifactId>ij</artifactId>
</dependency>
<dependency>
<groupId>trove</groupId>
<artifactId>trove</artifactId>
<version>${trove.version}</version>
</dependency>
<dependency>
<groupId>tech.tablesaw</groupId>
<artifactId>tablesaw-core</artifactId>
<version>${tablesaw-core.version}</version>
</dependency>
<dependency>
<groupId>net.tlabs-data</groupId>
<artifactId>tablesaw_${tablesaw-core.version}-parquet</artifactId>
<version>${tablesaw-parquet.version}</version>
</dependency>
<dependency>
<groupId>info.picocli</groupId>
<artifactId>picocli</artifactId>
</dependency>
<dependency>
<groupId>net.imagej</groupId>
<artifactId>imagej</artifactId>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-api</artifactId>
<version>5.4.2</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-engine</artifactId>
<version>5.4.2</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.github.erosb</groupId>
<artifactId>everit-json-schema</artifactId>
<version>1.14.2</version>
<scope>test</scope>
</dependency>
</dependencies>
</project>
28 changes: 28 additions & 0 deletions release.properties
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#release configuration
#Thu Sep 21 17:18:02 CEST 2023
scm.commentPrefix=[maven-release-plugin]
project.scm.org.embl.mobie\:mobie-viewer-fiji.url=https\://github.com/mobie/mobie-viewer-fiji
exec.pomFileName=pom.xml
pushChanges=false
releaseStrategyId=default
project.dev.org.embl.mobie\:mobie-viewer-fiji=4.0.8-SNAPSHOT
project.scm.org.embl.mobie\:mobie-viewer-fiji.connection=scm\:git\:https\://github.com/mobie/mobie-viewer-fiji
project.rel.org.embl.mobie\:mobie-viewer-fiji=4.0.7
projectVersionPolicyConfig=<projectVersionPolicyConfig>${projectVersionPolicyConfig}</projectVersionPolicyConfig>\n
scm.tag=mobie-viewer-fiji-4.0.7
remoteTagging=true
exec.additionalArguments=-Dgpg.skip\=true
scm.branchCommitComment=@{prefix} prepare branch @{releaseLabel}
projectVersionPolicyId=default
scm.url=scm\:git\:git@github.com\:mobie/mobie-viewer-fiji
scm.tagNameFormat=@{project.artifactId}-@{project.version}
pinExternals=false
preparationGoals=clean verify
scm.releaseCommitComment=@{prefix} prepare release @{releaseLabel}
exec.snapshotReleasePluginAllowed=false
project.scm.org.embl.mobie\:mobie-viewer-fiji.developerConnection=scm\:git\:git@github.com\:mobie/mobie-viewer-fiji
exec.activateProfiles=deploy-to-scijava
project.scm.org.embl.mobie\:mobie-viewer-fiji.tag=mobie-viewer-fiji-3.0.9
scm.developmentCommitComment=@{prefix} prepare for next development iteration
scm.rollbackCommitComment=@{prefix} rollback the release of @{releaseLabel}
completedPhase=generate-release-poms

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