Merge pull request #1480 from milaboratory/fix-shmt-export

fix shmt export
milaboratory · Dec 15, 2023 · ef15e3c · ef15e3c
2 parents 0561370 + dcf0ffd
commit ef15e3c
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diff --git a/build.gradle.kts b/build.gradle.kts
@@ -134,7 +134,7 @@ val toObfuscate: Configuration by configurations.creating {
 val obfuscationLibs: Configuration by configurations.creating
 
 
-val mixcrAlgoVersion = "4.6.0"
+val mixcrAlgoVersion = "4.6.0-3-fix-shmt-export"
 // may be blank (will be inherited from mixcr-algo)
 val milibVersion = ""
 // may be blank (will be inherited from mixcr-algo or milib)

diff --git a/changelogs/v4.6.1.md b/changelogs/v4.6.1.md
@@ -0,0 +1,7 @@
+## 🛠️ Minor improvements & fixes
+
+- Fixed parsing of optional arguments
+  for `exportShmTreesWithNodes`: `-nMutationsRelative`, `-aaMutations`, `-nMutations`, `-aaMutationsRelative`, `-allNMutations`, `-allAAMutations`, `-allNMutationsCount`, `-allAAMutationsCount`.
+- Fixed parsing of optional arguments for `exportClones`
+  and `exportAlignments`: `-allNMutations`, `-allAAMutations`, `-allNMutationsCount`, `-allAAMutationsCount`.
+- Fixed possible errors on exporting amino acid mutations in `exportShmTreesWithNodes`