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chore: fix maths notations
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mbhall88 committed Nov 22, 2024
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Expand Up @@ -339,9 +339,9 @@ For a full description of the method, see the [paper][doi].
### Two-set strategy

The two-set strategy is the default method used by LRGE. It involves randomly selecting a two distinct subsets of reads
from the input. One subset is deemed the target set ($T$) and the other the query set ($Q$). Each read $q_i$ in $Q$ is overlapped
against $T$ and a genome size ($\textbf{GS}$) estimate is generated for that read ($\textbf{GS}_{T,q_i}$). The estimate is calculated based on
the number of overlaps of $q_i$ with reads in $T$ ($O_{T,q_i}$), according to the formula:
from the input. One subset is deemed the target set ($T$) and the other the query set ($Q$). Each read $`q_i`$ in $Q$ is overlapped
against $T$ and a genome size ($\textbf{GS}$) estimate is generated for that read ($`\textbf{GS}_{T,q_i}`$). The estimate is calculated based on
the number of overlaps of $`q_i`$ with reads in $T$ ($`O_{T,q_i}`$), according to the formula:

```math
\textbf{GS}_{T,q_i} \approx \frac{\vert T \vert \cdot \vert q_i \vert + \overline{t \in T} - 2 \cdot \textbf{OT}}{O_{T,q_i}}
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