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updated packages and references
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loelschlaeger committed Oct 14, 2024
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Expand Up @@ -66,7 +66,7 @@ Suggests:
testthat (>= 3.0.0)
Depends: R (>= 3.5.0)
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
RoxygenNote: 7.3.2
RdMacros: Rdpack
VignetteBuilder: knitr
LazyData: true
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3 changes: 3 additions & 0 deletions development_packages.R
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Expand Up @@ -10,6 +10,9 @@ if (!require("DT", quietly = TRUE)) {
if (!require("markdown", quietly = TRUE)) {
renv::install("markdown", prompt = FALSE)
}
if (!require("mlogit", quietly = TRUE)) {
renv::install("mlogit", prompt = FALSE)
}
if (!require("R.utils", quietly = TRUE)) {
renv::install("R.utils", prompt = FALSE)
}
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138 changes: 65 additions & 73 deletions inst/REFERENCES.bib
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Expand Up @@ -4,17 +4,17 @@ @Book{Agresti2015
title = {Foundations of linear and generalized linear models},
year = {2015},
isbn = {978-1-118-73003-4},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Akaike1974,
author = {Akaike, H.},
journal = {IEEE Transactions on Automatic Control},
title = {{A New Look at the Statistical Model Identification}},
title = {A new look at the statistical model identification},
year = {1974},
volume = {19},
doi = {10.1109/TAC.1974.1100705},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Albert1993,
Expand All @@ -24,7 +24,7 @@ @Article{Albert1993
year = {1993},
volume = {88},
doi = {10.2307/2290350},
groups = {RprobitB package},
groups = {RprobitB},
}

@InProceedings{Aldous1985,
Expand All @@ -36,7 +36,7 @@ @InProceedings{Aldous1985
editor = {Hennequin, P. L.},
pages = {1--198},
publisher = {Springer Berlin Heidelberg},
groups = {RprobitB package},
groups = {RprobitB},
isbn = {978-3-540-39316-0},
}

Expand All @@ -47,15 +47,15 @@ @Article{Allenby1998
year = {1998},
volume = {89},
doi = {10.1016/S0304-4076(98)00055-4},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Bauer2019,
author = {Bauer, D. and B\"{u}scher, S. and Batram, M.},
journal = {Second International Choice Modelling Conference in Kobe},
title = {Non-parameteric estiation of mixed discrete choice models},
year = {2019},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{BenAkiva1993,
Expand All @@ -65,7 +65,7 @@ @Article{BenAkiva1993
year = {1993},
pages = {88--97},
volume = {1413},
groups = {RprobitB package},
groups = {choicedata, RprobitB},
publisher = {SAGE Publishing},
}

Expand All @@ -76,7 +76,7 @@ @Article{Blackwell1973
year = {1973},
pages = {353--355},
volume = {1},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Bliss1934,
Expand All @@ -87,136 +87,128 @@ @Article{Bliss1934
number = {2037},
volume = {79},
doi = {10.1126/science.79.2037.38},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Burda2008,
author = {Burda, M. and Harding, M. and Hausman, J.},
journal = {Journal of Econometrics},
title = {A {Bayesian} mixed logit-probit model for multinomial choice},
title = {A Bayesian Mixed Logit–Probit Model for Multinomial Choice},
year = {2008},
number = {2},
volume = {147},
doi = {10.1016/j.jeconom.2008.09.029},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Croissant2020,
author = {Croissant, Y.},
journal = {Journal of Statistical Software},
title = {Estimation of random utility models in {R}: the mlogit package},
title = {Estimation of Random Utility Models in \proglang{R}: The \pkg{mlogit} Package},
year = {2020},
number = {11},
volume = {95},
doi = {10.18637/jss.v095.i11},
groups = {RprobitB package},
groups = {choicedata, RprobitB},
}

@Article{Fawcett2006,
author = {Fawcett, T.},
journal = {Pattern Recognition Letters},
title = {An introduction to {ROC} analysis},
title = {An Introduction to ROC Analysis},
year = {2006},
number = {8},
volume = {27},
doi = {10.1016/j.patrec.2005.10.010},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Gelman1992,
author = {Gelman, A. and Rubin, D. B.},
journal = {Statistical Science},
title = {Inference from iterative simulation using multiple sequences},
title = {Inference from Iterative Simulation Using Multiple Sequences},
year = {1992},
number = {4},
volume = {7},
doi = {10.1214/ss/1177011136},
groups = {RprobitB package},
groups = {RprobitB},
publisher = {Institute of Mathematical Statistics},
}

@Article{Geweke1998,
author = {Geweke, J.},
journal = {Computing Science and Statistics (series)},
title = {Efficient simulation from the multivariate normal and {Student-t} distributions subject to linear constraints and the evaluation of constraint probabilities},
journal = {Computing Science and Statistics},
title = {Efficient Simulation from the Multivariate Normal and Student-t Distributions Subject to Linear Constraints and the Evaluation of Constraint Probabilities},
year = {1998},
volume = {23},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Gronau2017,
author = {Gronau, Q. F. and Sarafoglou, A. and Matzke, D. and Ly, A. and Boehm, U. and Marsman, M. and Leslie, D. S. and Forster, J. J. and Wagenmakers, E. and Steingroever, H.},
journal = {Journal of Mathematical Psychology},
title = {A tutorial on bridge sampling},
title = {A Tutorial on Bridge Sampling},
year = {2017},
volume = {81},
doi = {10.1016/j.jmp.2017.09.005},
groups = {RprobitB package},
groups = {RprobitB},
publisher = {Elsevier},
}

@InBook{Hammersley1964,
author = {Hammersley, J. M. and Handscomb, D. C.},
chapter = {5},
editor = {Bartlett, M. S. and Cox, D. R.},
pages = {50--75},
publisher = {Springer Netherlands},
title = {General principles of the {Monte Carlo} method},
year = {1964},
address = {Dordrecht},
isbn = {978-94-009-5819-7},
abstract = {Every Monte Carlo computation that leads to quantitative results may be regarded as estimating the value of a multiple integral. For suppose that no computation requires more than N(= 1010 say) random numbers; then the results will be a (vector-valued) function 5.1.1{\$}{\$}R{\backslash}left( {\{}{\{}{\backslash}xi {\_}1{\}},{\backslash}xi , {\backslash}ldots ,{\{}{\backslash}xi {\_}N{\}}{\}} {\backslash}right){\$}{\$}of the sequence of random numbers $\xi$1,$\xi$2,{\ldots}. This is an unbiased estimator of 5.1.2{\$}{\$}{\backslash}int{\_}0^1 {\{}...{\}} {\backslash}int{\_}0^1 {\{}{\}} R{\backslash}left( {\{}{\{}x{\_}1{\}}....,{\{}x{\_}N{\}}{\}} {\backslash}right)d{\{}x{\_}1{\}}...d{\{}x{\_}N{\}}.{\$}{\$}},
booktitle = {Monte Carlo Methods},
doi = {10.1007/978-94-009-5819-7_5},
groups = {RprobitB package},
url = {https://doi.org/10.1007/978-94-009-5819-7_5},
@Article{Hammersley1964,
author = {Hammersley, J. M. and Handscomb, D. C.},
journal = {Springer Verlag},
title = {General Principles of the Monte Carlo Method},
year = {1964},
doi = {10.1007/978-94-009-5819-7_5},
groups = {RprobitB},
}

@Article{Hewig2011,
author = {Hewig, J. and Kretschmer, N. and Trippe, R. H. and Hecht, H. and Coles, M. G. H. and Holroyd, C. B. and Miltner, W. H. R.},
author = {Hewig, Johannes and Kretschmer, Nora and Trippe, Ralf H. and Hecht, Holger and Coles, Michael G. H. and Holroyd, Clay B. and Miltner, Wolfgang H. R.},
journal = {Psychophysiology},
title = {Why humans deviate from rational choice},
year = {2011},
number = {4},
pages = {507--514},
volume = {48},
doi = {10.1111/j.1469-8986.2010.01081.x},
groups = {RprobitB package},
doi = {https://doi.org/10.1111/j.1469-8986.2010.01081.x},
groups = {RprobitB, dissertation},
}

@Article{Imai2005,
author = {Imai, K. and van Dyk, D. A.},
journal = {Journal of Econometrics},
title = {A {Bayesian} analysis of the multinomial probit model using marginal data augmentation},
title = {A Bayesian Analysis of the Multinomial Probit Model Using Marginal Data Augmentation},
year = {2005},
volume = {124},
groups = {RprobitB package},
groups = {RprobitB},
}

@Book{Jeffreys1998,
author = {Jeffreys, Harold},
publisher = {OUP Oxford},
title = {The theory of probability},
year = {1998},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Li2019,
author = {Li, Y. and Schofield, E. and G\"{o}nen, M.},
author = {Li, Y. and Schofield, E. and Gönen, M.},
journal = {Journal of Mathematical Psychology},
title = {A tutorial on {Dirichlet} process mixture modeling},
year = {2019},
volume = {91},
doi = {10.1016/j.jmp.2019.04.004},
groups = {RprobitB package},
groups = {RprobitB},
}

@Book{Marin2014,
author = {Marin, J. and Robert, C.},
publisher = {Springer Verlag},
title = {{Bayesian Essentials with R}},
title = {Bayesian essentials with {R}},
year = {2014},
doi = {10.1007/978-1-4614-8687-9},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{McCulloch1994,
Expand All @@ -226,7 +218,7 @@ @Article{McCulloch1994
year = {1994},
volume = {64},
doi = {10.1016/0304-4076(94)90064-7},
groups = {RprobitB package},
groups = {RprobitB},
}

@Book{McElreath2020,
Expand All @@ -235,7 +227,7 @@ @Book{McElreath2020
title = {Statistical rethinking: a {Bayesian} course with examples in {R} and {Stan}},
year = {2020},
doi = {10.1201/9780429029608},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Meijer2006,
Expand All @@ -246,7 +238,7 @@ @Article{Meijer2006
number = {2},
pages = {227--244},
volume = {21},
groups = {RprobitB package},
groups = {choicedata, RprobitB},
publisher = {Wiley Online Library},
}

Expand All @@ -258,7 +250,7 @@ @Article{Neal2000
number = {2},
volume = {9},
doi = {10.2307/1390653},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Newton1994,
Expand All @@ -268,18 +260,26 @@ @Article{Newton1994
year = {1994},
number = {1},
volume = {56},
groups = {RprobitB package},
groups = {RprobitB},
publisher = {Wiley Online Library},
}

@Article{Nobile1998,
author = {Nobile, A.},
journal = {Statistics and Computing},
title = {A hybrid {Markov} chain for the {Bayesian} analysis of the multinomial probit model},
title = {A hybrid markov chain for the {Bayesian} analysis of the multinomial {Probit} model},
year = {1998},
volume = {8},
doi = {10.1023/A:1008905311214},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Oelschlaeger2020,
author = {Oelschl\"{a}ger, L. and Bauer, D.},
journal = {TRB Annual Meeting 2021},
title = {Bayes Estimation of Latent Class Mixed Multinomial Probit Models},
year = {2020},
groups = {RprobitB},
}

@Article{Rasmussen1999,
Expand All @@ -288,7 +288,7 @@ @Article{Rasmussen1999
title = {The infinite {Gaussian} mixture model},
year = {1999},
volume = {12},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Sachs2017,
Expand All @@ -300,7 +300,7 @@ @Article{Sachs2017
pages = {1--19},
volume = {79},
doi = {10.18637/jss.v079.c02},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Schwarz1978,
Expand All @@ -309,38 +309,30 @@ @Article{Schwarz1978
title = {Estimating the dimension of a model},
year = {1978},
volume = {6},
groups = {RprobitB package},
groups = {RprobitB},
}

@Article{Sethuraman1994,
author = {Sethuraman, J.},
journal = {Statistica Sinica},
title = {A constructive definition of dirichlet priors},
title = {A constructive definition of {Dirichlet} priors},
year = {1994},
number = {2},
pages = {639--650},
volume = {4},
groups = {RprobitB package},
groups = {RprobitB},
publisher = {Institute of Statistical Science, Academia Sinica},
url = {http://www.jstor.org/stable/24305538},
}

@Book{Train2009,
author = {Train, K.},
author = {Train, Kenneth E.},
publisher = {Cambridge University Press},
title = {Discrete choice methods with simulation},
year = {2009},
edition = {2},
doi = {10.1017/CBO9780511805271},
groups = {RprobitB package},
}

@Article{Tversky1988,
author = {Tversky, Amos and Kahneman, Daniel},
journal = {Decision making: Descriptive, normative, and prescriptive interactions},
title = {Rational choice and the framing of decisions},
year = {1988},
pages = {167--192},
groups = {RprobitB package},
groups = {choicedata, RprobitB, dissertation},
}

@Article{Watanabe2010,
Expand All @@ -350,5 +342,5 @@ @Article{Watanabe2010
year = {2010},
number = {12},
volume = {11},
groups = {RprobitB package},
groups = {RprobitB},
}
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