revert to pip with windows-latest->windows-2019

.github/workflows/run-unit-tests.yml

@@ -9,69 +9,69 @@ on:
     branches: [main]
   workflow_dispatch:
 
+#jobs:
+#  test:
+#    runs-on: ${{ matrix.os }}
+#    defaults:
+#      run:
+#        shell: bash -l {0}
+#    strategy:
+#      fail-fast: false
+#      matrix:
+#        os: [ macos-latest, ubuntu-latest, windows-2019 ]
+#        python-version: ['3.9', '3.10', '3.11']
+#    steps:
+#    - uses: actions/checkout@v3  # for the test data
+#    - uses: conda-incubator/setup-miniconda@v2
+#      with:
+#        python-version: ${{ matrix.python-version }}
+#        channels: conda-forge
+#        channel-priority: true
+#        activate-environment: test
+#        mamba-version: "*"
+#    - name: Install dependencies
+#      run: |
+#        mamba info
+#        mamba list
+#        mamba install -c conda-forge rasterio opencv numpy click tqdm pyyaml pytest pytest-cov
+#        mamba list
+#    - name: Run unit tests
+#      run: |
+#        python -m pytest --cov=simple_ortho --cov-report=term-missing --cov-report=xml:coverage.xml ./tests
+
 jobs:
   test:
     runs-on: ${{ matrix.os }}
-    defaults:
-      run:
-        shell: bash -l {0}
     strategy:
       fail-fast: false
       matrix:
-        os: [ macos-latest, ubuntu-latest, windows-2019 ]
         python-version: ['3.9', '3.10', '3.11']
+        os: [ macos-latest, ubuntu-latest, windows-2019 ]
     steps:
-    - uses: actions/checkout@v3  # for the test data
-    - uses: conda-incubator/setup-miniconda@v2
+    - uses: actions/checkout@v3
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v4
       with:
         python-version: ${{ matrix.python-version }}
-        channels: conda-forge
-        channel-priority: true
-        activate-environment: test
-        mamba-version: "*"
     - name: Install dependencies
       run: |
-        mamba info
-        mamba list
-        mamba install -c conda-forge rasterio opencv numpy click tqdm pyyaml pytest pytest-cov
-        mamba list
-    - name: Run unit tests
+        python -m pip install --upgrade pip
+        python -m pip install flake8 pytest pytest-cov
+        python -m pip install rasterio "opencv-python-headless<4.8" numpy click tqdm pyyaml
+        python -m pip list
+    - name: Lint with flake8
+      run: |
+        # stop the build if there are Python syntax errors or undefined names
+        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+    - name: Test with pytest
+      timeout-minutes: 5
       run: |
         python -m pytest --cov=simple_ortho --cov-report=term-missing --cov-report=xml:coverage.xml ./tests
-
-#jobs:
-#  test:
-#    runs-on: ${{ matrix.os }}
-#    strategy:
-#      fail-fast: false
-#      matrix:
-#        python-version: ['3.8', '3.9', '3.10', '3.11']
-#        os: [ macos-latest, ubuntu-latest, windows-latest ]
-#    steps:
-#    - uses: actions/checkout@v3
-#    - name: Set up Python ${{ matrix.python-version }}
-#      uses: actions/setup-python@v4
-#      with:
-#        python-version: ${{ matrix.python-version }}
-#    - name: Install dependencies
-#      run: |
-#        python -m pip install --upgrade pip
-#        python -m pip install flake8 pytest pytest-cov
-#        python -m pip install rasterio "opencv-python-headless<4.8" numpy click tqdm pyyaml
-#        python -m pip list
-#    - name: Lint with flake8
-#      run: |
-#        # stop the build if there are Python syntax errors or undefined names
-#        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
-#        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-#        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
-#    - name: Test with pytest
-#      timeout-minutes: 5
-#      run: |
-#        python -m pytest --cov=simple_ortho --cov-report=term-missing --cov-report=xml:coverage.xml ./tests
-#    - name: Upload coverage
-#      uses: codecov/codecov-action@v3
-#      with:
-#        fail_ci_if_error: true
-#        files: ./coverage.xml
-#        token: ${{ secrets.CODECOV_TOKEN }}
+    - name: Upload coverage
+      uses: codecov/codecov-action@v3
+      with:
+        fail_ci_if_error: true
+        files: ./coverage.xml
+        token: ${{ secrets.CODECOV_TOKEN }}