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tweaked README
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jr-leary7 committed Nov 17, 2023
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Expand Up @@ -115,7 +115,8 @@ scLANE_models_glm <- testDynamic(sim_data,
pt = order_df,
genes = gene_sample,
size.factor.offset = cell_offset,
n.cores = 4)
n.cores = 4,
verbose = FALSE)
```

After the function finishes running, we use `getResultsDE()` to generate a sorted table of DE test results, with one row for each gene & lineage. The GLM mode uses a simple likelihood ratio test to compare the null & alternate models, with the test statistic assumed to be [asymptotically Chi-squared distributed](https://en.wikipedia.org/wiki/Likelihood-ratio_test).
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