v2.1.1 update:
- Added paired end analysis for FASTQ. The previous version (v2.1) only supported FASTA sequence data.
v2.1 update:
- Updated MAPref to v3.0 with new MAP OTU labels as used on the Microbe Atlas Project website (https://microbeatlas.org/)
- Updated NCBI taxonomy (Feb 2021)
- Added paired end analysis which automatically handles overlapping and non-overlapping paired end sequence mapping
- Added a sensitive mode (-sens) for more accurate analysis needed in some applications
- Added -asvotutable option to generate a merged count table with MAP OTU labels or NCBI taxonomy using as input one or more ASV count tables that may cover different 16S regions