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@jakobilab

Jakobi Lab

Studying the interplay of coding and non-coding RNAs, such as the novel class of circRNAs in heart disease
README.md

Welcome to the Jakobi Lab

Languages and Tools we use:

bash docker flask git hugo kubernetes linux perl python

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  1. circtools circtools Public

    Forked from dieterich-lab/circtools

    circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

    Python 4

  2. slurm-tools slurm-tools Public

    Tools for daily work with the SLURM scheduler

    Shell

  3. bioinfo-scripts bioinfo-scripts Public

    Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformatician's scripts/ folder

    Shell 1 1

  4. saruman saruman Public

    SARUMAN: Using GPU programming for short read mapping

    C

Repositories

Showing 10 of 13 repositories
  • long_read_circRNA Public Forked from omiics-dk/long_read_circRNA

    CircRNA detection in nanopore data

    jakobilab/long_read_circRNA’s past year of commit activity
    Shell 0 MIT 4 0 0 Updated Nov 18, 2024
  • circtools Public Forked from dieterich-lab/circtools

    circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

    jakobilab/circtools’s past year of commit activity
    Python 0 GPL-3.0 22 2 2 Updated Oct 18, 2024
  • bioinfo-scripts Public

    Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformatician's scripts/ folder

    jakobilab/bioinfo-scripts’s past year of commit activity
    Shell 1 1 0 0 Updated May 29, 2024
  • .github Public

    Public Jakobi lab repository

    jakobilab/.github’s past year of commit activity
    0 0 0 0 Updated May 1, 2024
  • circhemy Public

    Convert and query IDs of circular RNAs from many different databases

    jakobilab/circhemy’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Apr 26, 2024
  • cts505 Public

    Repository holding code and other documents for the CTS 505 course "Introduction to bioinformatics" at the University of Arizona, College of Medicine Phoenix.

    jakobilab/cts505’s past year of commit activity
    TeX 0 GPL-3.0 0 0 0 Updated Dec 5, 2023
  • slurm-tools Public

    Tools for daily work with the SLURM scheduler

    jakobilab/slurm-tools’s past year of commit activity
    Shell 0 GPL-3.0 0 0 0 Updated Nov 6, 2023
  • jakobilab-web Public Forked from HugoBlox/theme-research-group

    👥 Create a stunning Research Group Website with Wowchemy and Hugo

    jakobilab/jakobilab-web’s past year of commit activity
    TeX 0 MIT 362 0 0 Updated Sep 1, 2023
  • wowchemy-hugo-modules Public Forked from HugoBlox/hugo-blox-builder

    🔥 The website builder for Hugo. No code, build with widgets! 创建在线课程，学术简历或初创网站。

    jakobilab/wowchemy-hugo-modules’s past year of commit activity
    HTML 0 MIT 2,934 0 11 Updated Mar 7, 2023
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    jakobilab/bioconda-recipes’s past year of commit activity
    Shell 0 MIT 3,306 0 0 Updated Aug 27, 2022
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