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keep working on dortmund
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SalvadorBrandolin committed Oct 24, 2023
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88 changes: 0 additions & 88 deletions coso.ipynb

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109 changes: 109 additions & 0 deletions prueba.ipynb
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{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"from rdkit import Chem\n",
"\n",
"from ugropy import Groups"
]
},
{
"cell_type": "code",
"execution_count": 19,
"metadata": {},
"outputs": [],
"source": [
"a = Groups(\"1-propanol\")"
]
},
{
"cell_type": "code",
"execution_count": 20,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"((3,),)"
]
},
"execution_count": 20,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"a.chem_object.GetSubstructMatches(\n",
" Chem.MolFromSmarts(\"[$([OH][CH2][*]),$([OH][CH][*][!#6]),$([OH][CH0][*][!#6][!#6])]\")\n",
")"
]
},
{
"cell_type": "code",
"execution_count": 21,
"metadata": {},
"outputs": [
{
"data": {
"image/png": 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",
"text/plain": [
"<rdkit.Chem.rdchem.Mol at 0x7fcfec31f530>"
]
},
"execution_count": 21,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"a.chem_object"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"{'CH3': 1, 'CH2': 2, 'OH': 1}"
]
},
"execution_count": 11,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"a.psrk_groups"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "ugropy",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.10.6"
},
"orig_nbformat": 4
},
"nbformat": 4,
"nbformat_minor": 2
}
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