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@ijtools

ijtools

README.md

ijTools

ijTools is a collection of plugins for the ImageJ/Fiji platform. Some of them have specialized aims and/or are focussed on processing of specific project data.

Short curated list of rather stable projects:

Plugins

  • ijGranulometry: a library that allows to apply grayscale granulometry using mathematical morphology operators. Requires the MorphoLibJ library.
  • Digital Shapes A collection of plugins for generating discretized version of classical geometric shapes in 2D (disks, ellipses, oriented boxes...) and in 3D (balls, elllipsoids, cuboids, cylinders...).
  • binaryMorphology: implementation of morphological filters for binary images relying on distance maps. Can be faster for large values of structuring element radius.
  • Rotated Crop Plugin Crop 2D/3D images with various box orientations.
  • ScaleBar3d Simple plugin to add a Scale Bar to 3D images, as a 3D cylinder.

Libraries

  • ijGeometry a Geometry library for ImageJ
  • sliding-strel Morphological dilation and erosion using sliding structuring elements

Utilities

Pinned Loading

  1. ijGranulometry ijGranulometry Public

    Grayscale granulometry plugin for ImageJ. Requires MorphoLibJ plugin.

    Java 4

  2. binary-morphology binary-morphology Public

    Mathematical morphology for binary images

    Java

  3. ijGeometry ijGeometry Public

    Geometry library for ImageJ/Fiji

    Java

  4. sliding-strel sliding-strel Public

    Morphological dilation and erosion using sliding structuring elements

    Java

  5. ijRotatedCrop ijRotatedCrop Public

    Generate rotated crop images from 2D/3D images

    Java

  6. imagej-plugin-template imagej-plugin-template Public template

    Simple project template for creating ImageJ Plugins.

    Java

Repositories

Showing 10 of 19 repositories
  • RegionFeaturesJ Public
    ijtools/RegionFeaturesJ’s past year of commit activity
    Java 0 0 0 0 Updated Nov 7, 2024
  • ijRotatedCrop Public

    Generate rotated crop images from 2D/3D images

    ijtools/ijRotatedCrop’s past year of commit activity
    Java 0 0 0 0 Updated Oct 25, 2024
  • Directional_Filters Public

    Additional morphological directional filters for MorphoLibJ

    ijtools/Directional_Filters’s past year of commit activity
    Java 0 0 0 0 Updated Oct 8, 2024
  • imagej-plugin-template Public template

    Simple project template for creating ImageJ Plugins.

    ijtools/imagej-plugin-template’s past year of commit activity
    Java 0 0 0 0 Updated Dec 7, 2023
  • Simple_Register Public
    ijtools/Simple_Register’s past year of commit activity
    Java 0 0 0 0 Updated Nov 1, 2023
  • ijDigiShapes Public

    Generate synthetic images of geometric shapes within ImageJ

    ijtools/ijDigiShapes’s past year of commit activity
    Java 0 0 0 0 Updated Oct 6, 2023
  • .github Public

    A collection of plugins for ImageJ/Fiji.

    ijtools/.github’s past year of commit activity
    0 0 0 0 Updated Aug 7, 2023
  • ijGeometry Public

    Geometry library for ImageJ/Fiji

    ijtools/ijGeometry’s past year of commit activity
    Java 0 0 0 0 Updated Aug 7, 2023
  • ijRegister Public

    registration toolkit for ImageJ

    ijtools/ijRegister’s past year of commit activity
    Java 1 0 0 0 Updated Jul 28, 2023
  • ijLabelMapToPolygons Public

    ImageJ plugin that converts regions from label maps into polygons

    ijtools/ijLabelMapToPolygons’s past year of commit activity
    Java 0 0 0 0 Updated May 27, 2023
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